Suttonella sp. R2A3: L0B52_01885
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Entry
L0B52_01885 CDS
T07824
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
sutr
Suttonella sp. R2A3
Pathway
sutr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sutr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L0B52_01885 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sutr03400
]
L0B52_01885 (uvrB)
DNA repair and recombination proteins [BR:
sutr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L0B52_01885 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L0B52_01885 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
Kinesin
DUF7900
DUF87
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
UJF24912
LinkDB
All DBs
Position
complement(386291..388288)
Genome browser
AA seq
665 aa
AA seq
DB search
MSERFKLVADYQPAGDQPQAIKQLVEGLEDGLAKQTLLGVTGSGKTYTMANIIAEVQRPA
LIMAPNKTLAAQLYGEMRAFFPHNAVEYFVSYYDYYQPEAYVPASDTFIEKDASINEHIE
QMRLSATKAILERRDTIIVASVSSIYGLGDPKLYMKMVLHINRGTHIDQRAMLSRLAELQ
YTRNDHQLLRGTFRVRGDVIDIMPAESDWYALRVELFDNEVESIRYFDPLTGELLEQIPR
VTIYPKTHYATPRGTIVEAAESIKAELRDRLAALNASNKLVEAQRLQQRTQFDLEMMLEL
GYCSGIENYSRYLSGRNAGEPPPTLHDYLPADAILMLDESHVTVPQLNGMYRGDRSRKET
LVDYGFRLPSALDNRPLRFEEFETIAPQTIYISATPGDYEQEHSGQIVEQVVRPTGLLDP
QVEIRPVDRQVEDVLGEIRNRAAIDERVLITTLTKKMAEDLTDYLLEHDVRVRYIHSDVN
TVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAIFDADKEGFLRGERALIQTIGR
AARNAKGMAILYADKITKSMAKAMEETARRRDKQIAHNEAHGITPTTIRKQVQDVMEGAH
VAVKASKAHKAKQGKTSEILTPAEADKRIRQLEKTMLEHAQNLEFEQAAALRDEIKNLQA
QVFMQ
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcgttttaagttagttgctgattatcagccagctggcgaccaaccacaggcg
attaagcaactggttgaaggcttagaagacggactcgccaaacaaacgttgctcggggta
accggttctggcaaaacctacaccatggccaatattatcgccgaggtgcagcgtccagcg
ttaattatggcaccgaataaaacgctggctgcgcaactttatggcgaaatgcgcgcgttc
ttcccgcataacgcagtggaatattttgtttcctactatgattattatcagccagaagcg
tacgttccggcctccgatacctttattgaaaaagatgcctcgattaacgaacacatcgaa
cagatgcgcttatcagcaactaaagcgatcctggaacgtcgcgatacgatcatcgtcgcc
agcgtgtcgtcgatttacggtttgggcgatcccaagctgtatatgaagatggtgttgcat
attaatcgtggcacccatattgatcaacgcgcgatgctctcacgcctggcagagctgcaa
tacacgcgtaatgaccatcaactgttacgtgggacctttcgtgtacgtggtgatgtgatt
gacattatgccggcggagtctgattggtatgcgttgcgggttgagctttttgataatgaa
gtggaatcgattcgttattttgatccactgactggtgaattgctcgagcaaattccacgc
gtaaccatttacccgaaaacacactatgcgaccccacgcggcacgattgtcgaggcggcg
gagtcgattaaagctgaattgcgtgatcgcctggcagcgctaaatgcaagcaataaactg
gttgaagcgcagcgcctgcaacagcggacccagtttgatctggaaatgatgctcgagctt
ggctattgttcaggcattgaaaactactcgcggtatttgtctggacgcaacgccggtgaa
ccgccacccacactgcacgattatttgccagcggatgccattttgatgcttgatgaaagc
catgtgacggtgccacagctcaatggcatgtatcgtggtgaccgttcacgcaaagaaacc
ttagttgattatgggtttcgcctgccttcagcgctcgataatcgtccgttgcgtttcgaa
gagtttgaaaccattgcgccacaaacgatttatatttccgccacccccggggattacgaa
caagaacattcaggacaaattgtcgagcaagtggtgcgtcctaccggcttactggatccg
caggtcgagattcgtccggttgatcgtcaggttgaggacgtactgggtgaaattcgtaac
cgagcagcgatcgatgaacgggtgctgatcaccacattgaccaaaaaaatggccgaagat
ttaaccgattatctgctcgaacatgacgtgcgtgtgcgctatatccactctgatgtgaat
accgttgagcgcatggaaatcatccgtgatttacgtttgggtgaatttgatgtgttggtg
gggattaacttgttgcgtgaaggcctagacatgccggaagtatccctggtcgcgatattt
gatgccgataaagaagggtttttgcgtggtgaacgcgcgttgattcaaacgattggtcga
gcggcgcgtaacgccaaaggtatggcaattctttatgccgataaaatcactaaatcgatg
gctaaagcaatggaagaaaccgcgcgtcgtcgtgataaacagattgcgcataatgaagcg
cacgggattacaccaaccacgattcgcaaacaggttcaagatgtgatggaaggtgcgcat
gtggcggtcaaggcgagtaaagcacataaggcaaagcaaggtaagacctcagaaatactc
acccccgcagaggccgataaacgcattcgtcagttggaaaaaaccatgctcgaacacgca
cagaatttggaatttgaacaagctgctgccttacgtgatgaaatcaaaaatcttcaagca
caggtgttcatgcaatag
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integrated database retrieval system
