Suttonella sp. R2A3: L0B52_04635
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Entry
L0B52_04635 CDS
T07824
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sutr
Suttonella sp. R2A3
Pathway
sutr03410
Base excision repair
sutr03430
Mismatch repair
sutr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sutr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L0B52_04635 (recJ)
03430 Mismatch repair
L0B52_04635 (recJ)
03440 Homologous recombination
L0B52_04635 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sutr03400
]
L0B52_04635 (recJ)
DNA repair and recombination proteins [BR:
sutr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
L0B52_04635 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
L0B52_04635 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
L0B52_04635 (recJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UJF23648
LinkDB
All DBs
Position
1006887..1008560
Genome browser
AA seq
557 aa
AA seq
DB search
MLLKDRPQRIDPNALPQAWHPLVRQIYASRLDDAEAYDKSLAALAPPQGLCDIDAGVTRI
IEALDYRENILIYGDYDVDGTTATALMVRVLRRLHAKVDWFLPDRRIHGYGLSIAGIDAL
NKRPDLIITVDNGIQSHAAVDYAREKDIDVLITDHHLPSETLPNACAVINPQRTDNTFNA
PNLCGVGVAFYLLLALRRALLTRGDWDKRVVLTDYLDLVALGTIADVVPLTQTNRILVHA
GLQRIRSRQGNAGILALCAIGNIDTTHISAQDIAFAIAPRLNAAGRMGDMRDGVALLLSD
DWQTAHEFANAFDIANRQRKAVESEMLQQALYLADRQQAVVCVHHQDWHEGVIGIVAGRL
KSRLNKPALIATDAQDPEWLKASLRSVEGVDIKALLDIAAAQLPAEALQYGGHAMAAGLS
VKRSQFSALTTALNQAFASTIGEHPQPYCYIDGALDPSLMQVDWANYLNQLEPWGAELPQ
PTFCNTFDVLECRILGSNHSRLSLREPQSGRTLTAVWFFNQADYAYGTRVRVIYALQVSR
FYGDERLNLLIEHIQAL
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttaaagaccgtcctcagcgcattgaccccaacgcgttgccacaggcgtggcat
ccgttggtgcgccaaatttatgccagccgcctagatgatgcagaggcttacgataaatcg
ctggccgccctagccccgcctcaaggcttgtgcgatatcgatgcgggtgtgacgcgcatc
atcgaagcgctcgactaccgagaaaatatcctgatctacggtgattatgatgtcgatggc
acaacagccactgcattaatggtgcgcgtattacgtcgcttacacgctaaagtggattgg
tttttacccgatcgacgcatccacggctatgggttaagcattgcaggcatcgacgcactc
aataaacgccctgatttaatcattaccgtggataatggcatccaaagtcacgcagccgtt
gattacgcacgcgaaaaagatattgatgtgttaattactgaccatcatttgccgagcgag
accctgcccaatgcgtgtgcggtaattaacccacaacgtactgacaataccttcaacgca
cccaacctgtgcggcgttggcgtggcgttttatcttttattagcattgcgtcgcgcttta
ttaacccgtggcgactgggataaacgcgtggtattaaccgattaccttgatctggtagcg
ctcggcacgattgccgatgtcgttcctctgacccagaccaaccgtattctcgtccatgct
ggcttacaacgcatccgcagccgccaaggtaacgccggcattttagcgctatgcgcgatt
ggtaatatcgataccacgcacatcagcgcacaagatatcgccttcgccatcgcaccacgg
ctaaacgctgctggacgcatgggggatatgcgtgatggcgtcgccttattgcttagcgat
gactggcagaccgcacacgaattcgctaatgcctttgacatagcaaaccgtcagcgcaag
gcggttgaaagcgaaatgctccagcaagcgctttatttagccgaccgtcagcaagcggtg
gtgtgcgttcatcaccaagactggcatgaaggcgtaatcggtattgttgccggacgcctt
aaatcgcgcctcaacaaacccgcgctcattgccaccgacgcacaagatcctgagtggctg
aaagcttccttgcgttcggtcgaaggggttgatattaaggcactcctcgatatcgcggca
gcacagctcccagcagaagcgttgcaatacggcggacacgcaatggctgccggactttca
gtaaaacgcagccaattcagcgcgttgactaccgcactcaatcaagcttttgcatcaacg
atcggcgaacaccctcagccttattgttatattgacggggcgctggatccgtctttgatg
caggtagattgggcaaattacctcaaccagctcgaaccgtggggggcagagctgccacaa
ccgaccttttgtaacacttttgatgtgctggaatgccgcattttaggcagcaaccactca
cgtctgagtttgcgcgagccgcaaagcggacgcaccctcacagcggtctggttttttaat
caagccgattatgcttacggcacacgggtgcgcgtcatttacgcgctacaagtcagccgg
ttttacggagatgagcgcctgaatttactcattgagcatattcaagcgctctaa
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