Suttonella sp. R2A3: L0B52_05950
Help
Entry
L0B52_05950 CDS
T07824
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sutr
Suttonella sp. R2A3
Pathway
sutr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sutr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L0B52_05950 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sutr03019
]
L0B52_05950 (pnp)
03016 Transfer RNA biogenesis [BR:
sutr03016
]
L0B52_05950 (pnp)
Enzymes [BR:
sutr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
L0B52_05950 (pnp)
Messenger RNA biogenesis [BR:
sutr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
L0B52_05950 (pnp)
Transfer RNA biogenesis [BR:
sutr03016
]
Prokaryotic type
tRNA degradation factors
L0B52_05950 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_SLS1_2
KH_2
KH-I_KHDC4-BBP
S1_2
OB_RRP5_4th
DUF5813
Motif
Other DBs
NCBI-ProteinID:
UJF23889
LinkDB
All DBs
Position
1258538..1260622
Genome browser
AA seq
694 aa
AA seq
DB search
MKHSISFAYGQHNVTLETGEIARQADGAVLVNMDDTVVLVTAVAKRDVAEGQDFFPLTVD
YQEKTYAAGKIPGGFFKREGRPSEAETLTSRLIDRPIRPLFPEGFFNEIQIIATVMSYNP
EVSADIPALIGASAALKLAGVPFSGPIGAARVGYKAGEYLLNPSDSALKASDLDLVVAGT
ESAVLMVESQADQLSEEVMLGAVMYGHEQMQAVINAINELADKAAKPAWDWQAPARDSAL
DEKIKDAYGKRLVEAYQIPDKQVRQATIAGIHSDAVEALASDEDGGWNAKQVGNYVHDLE
YRTVRDRVLAKEPRIDGRDTLTVRPITVRTGILPRVHGSALFTRGETQAIVAATLGTGRD
AQLLDTLGGEVKDPFMLHYNFPPYSVGETGRVGSPKRREIGHGRLARRGIEAVLPDEADF
PYVMRVVSEITESNGSSSMASVCGTSLALMDAGVPTKAPVAGIAMGLVKEGERFTVLTDI
LGDEDHLGDMDFKVAGSANGITALQMDIKINGITREIMNQALEQAKEGRLHILGIMNEAI
DHHRDEVSEYAPRFSTMRIDTDKIKDVIGKGGATIRSITEETGATIEIEDDGTIKIAAVD
KTAADEARRIIEEITAEPEIGRIYDGKVVKITDFGAFVAFLPGKEGLVHVSQIADYRVEN
VRDELSEGQEVKVKLIEVDRQGRVRLSIKEAKQD
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacattcaatctctttcgcttacggacaacacaacgtcacgcttgaaaccggcgaa
atcgcccgtcaagctgatggcgctgtgttggtaaatatggatgacacagtcgttttagta
actgctgtggcaaaacgagacgtcgcggaaggacaagactttttcccgctaaccgttgat
tatcaagaaaaaacctacgcagcgggcaaaatccctggtgggtttttcaagcgtgaaggt
cgtcctagtgaggctgaaacccttacctcgcggttaatcgaccgtcctattcgcccatta
ttccctgaaggattcttcaacgaaattcagattattgcgaccgtcatgtcgtataaccct
gaagtcagcgctgatatcccggcgttaattggtgcatcggctgcgttaaaactcgctggc
gtaccatttagcggcccgattggtgcagcgcgcgttggctataaagcgggtgagtacttg
ctcaacccgtctgatagcgctcttaaagcatctgatttggatttagtggttgctgggact
gaatcagcggtattgatggttgaatcgcaagccgatcaactctcagaagaagttatgctt
ggcgctgtgatgtatggtcatgagcaaatgcaagctgtgattaacgcgattaacgaatta
gccgataaagcagcgaaacctgcttgggattggcaagcgccagcccgcgatagcgcgctc
gatgagaaaattaaagacgcttatggcaagcgcttggttgaagcatatcagatccctgat
aagcaagttcgccaggcaaccatcgccggtattcacagcgatgcggtcgaagcgctcgct
agcgatgaagacggtggctggaacgccaaacaagttggcaactatgtgcatgacttggaa
taccgcactgtgcgtgatcgtgtgctcgctaaagagccacgcattgatggccgcgacacc
ttaaccgttcgcccgatcactgtacgcaccggtattctgccacgcgtacatggttctgca
ttattcacccgtggtgaaacacaagcgatcgttgcagcaacgttaggcacaggccgcgat
gcgcaattgctcgacactttgggtggcgaagtcaaagatccgttcatgcttcactacaat
ttcccaccgtattctgtcggtgagaccggtcgtgttggttcgccaaaacgccgcgaaatt
ggtcacggtcgcttggcgcgtcgtggtattgaagccgtgttacccgacgaagcggatttc
ccctatgtgatgcgtgtggtttctgaaatcaccgaatctaatggctctagctcaatggcc
tctgtgtgcggcacaagcttggcgttaatggacgctggcgtgccaaccaaggcgcctgta
gcgggtattgcgatgggtctggttaaagaaggcgagcgctttactgtcttaaccgacatc
ctgggcgacgaagatcaccttggcgacatggacttcaaagtagccggttcagctaatggc
attactgcgctgcaaatggacatcaagatcaacgggatcacccgcgagatcatgaaccaa
gcgctagagcaagccaaagaaggccgtctgcatatcttaggaatcatgaacgaagcgatt
gatcaccatcgtgatgaggtttctgaatacgcaccgcgctttagcaccatgcgtatcgac
accgacaaaatcaaagatgtgattggtaaaggtggggcaacgattcgttcgatcaccgaa
gaaaccggcgctacaatcgaaatcgaagacgatggcaccatcaagattgccgctgtcgat
aaaactgctgctgatgaagcacgtcgtatcattgaagaaatcaccgctgagccagaaatt
ggtcgtatttacgacggtaaagtggttaaaatcactgactttggtgcatttgttgcgttc
ctgccaggcaaagaaggcttggtacacgtgtctcaaatcgctgattaccgcgttgaaaac
gtgcgtgacgagcttagcgaaggtcaggaagttaaggttaaattgattgaagttgatcgc
caaggtcgcgttcgcttatcgatcaaagaagccaaacaagactaa
DBGET
integrated database retrieval system
