Suttonella sp. R2A3: L0B52_08145
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Entry
L0B52_08145 CDS
T07824
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sutr
Suttonella sp. R2A3
Pathway
sutr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sutr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L0B52_08145 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sutr03400
]
L0B52_08145 (recD)
Enzymes [BR:
sutr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
L0B52_08145 (recD)
DNA repair and recombination proteins [BR:
sutr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L0B52_08145 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
UvrD-helicase
Viral_helicase1
Helicase_RecD
AAA_22
SLFN-g3_helicase
SH3_13
PhoH
DEAD
ResIII
PIF1
AAA_16
AAA_7
NPHP3_N
UvrD_C
NACHT
nSTAND3
AAA
T2SSE
AAA_33
Motif
Other DBs
NCBI-ProteinID:
UJF24299
LinkDB
All DBs
Position
complement(1689747..1691324)
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AA seq
525 aa
AA seq
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MNDIAQYILMRQSAGDHQSFIDLLDKTFTAFDEGHTLYTHNQSPELKPELVISLNQAQAG
EYAPLVAHDQSLWLHRIFSAENTLATLLSERINSGDRSSAIDIKPFAEGLKPEQRLALEH
VLNHRLTLINGGPGTGKTFTIARVVQALFSECSNTDIALSAPTGKAAKRMYESLQTSITQ
DTHHFELPEAQTLHRLLGISQNRAPLYGMHNKLPHDVVIVDEASMLSLELAHALFSALKP
EARLILLGDADQLAAVDPGAVLHDLSRHSALQNHIITLTSSSRFSEEQGIGRLASTIQQN
DPGGLDALLAESADISWYPEPSEHFYQRLFTPYQPYINALSTAEQPKALFDLFNTYRLLC
ATHHGPYGTQQINRTLRALHQQEFNLPVNDEAFHGLPIMITRNDYTLQLFNGDIGLCLRD
SDGVLRAYFPDHEHPFDVSRLNPATVTDAYAMSVHKSQGSEFDYVALLGRAQDENILSRE
WFYTGVTRAKTSLSLYMDKTAIHYCLAHPSQRSTGLGILLDQHTA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacatcgctcaatatatccttatgcgccaatcagccggcgaccaccaatcgttt
atcgacttgcttgataaaaccttcaccgcctttgatgaaggccatactttatatacgcac
aaccagtcacctgagcttaagcctgaactggttatctcactcaatcaagcacaagcgggg
gaatacgcaccgttagtcgcccacgatcaatcgctgtggttacaccgcatcttttccgct
gaaaacactttagccactttgcttagcgaacgtattaatagtggtgataggtcatcagcc
atcgatattaaaccttttgccgaagggttaaagcccgagcagcgtcttgcacttgagcat
gtacttaaccatcgcttaactctgatcaacggcggacccggcactggcaaaacgttcacc
atcgcccgcgtggtacaagccttatttagcgaatgcagcaataccgatattgccttgagc
gcgccaaccggcaaagcggcgaaaaggatgtatgaatctttgcaaacaagcattacacaa
gatacgcaccatttcgagctacctgaggcacaaaccttacaccgcctattaggcatctcg
cagaaccgcgccccactttatggcatgcacaacaaactaccgcatgatgtggtgatcgtt
gatgaggcatcaatgctctcattagagctcgcccacgccttatttagcgcactcaaacca
gaagcacgattgatattgcttggcgatgccgaccaactggcggcggttgacccgggcgca
gtattacacgacctttctcgtcacagcgcactacaaaaccacatcatcaccttaacttcc
tcgagtcgttttagtgaagaacaaggtattggccgcctggcaagtaccattcagcaaaac
gaccctggtggactcgatgcactgcttgctgaatccgccgatatcagctggtacccagag
ccaagcgaacatttttaccagcgcttgtttactccgtatcaaccctatattaatgccttg
agcacagccgaacagcccaaggcgctatttgatctctttaacacctaccgattactgtgc
gccacccatcacggcccgtacggcacccagcaaatcaaccgcacgctgcgcgcgcttcac
cagcaggagttcaacctaccggtcaatgatgaggccttccatggcctgccgattatgatc
acccgcaacgattacaccctgcagctgtttaacggcgatattggcctctgcctgcgcgat
agcgatggcgtgctgcgcgcctatttcccggatcatgagcatccttttgatgtgtcgcgc
ttaaacccggcaaccgtcaccgacgcctacgcgatgagcgtgcataagtcacaaggctct
gagtttgactatgtcgccttgctcgggcgcgcccaagacgaaaacatactcagccgcgaa
tggttctacactggggtaacgcgtgcgaaaacgtcgctcagtctctatatggacaaaaca
gcgattcactactgccttgcccacccgagccaacgctcaaccggactcggcatcctgctt
gatcaacataccgcttaa
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