Suttonella sp. R2A3: L0B52_08215
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Entry
L0B52_08215 CDS
T07824
Symbol
tal
Name
(GenBank) transaldolase
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
sutr
Suttonella sp. R2A3
Pathway
sutr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sutr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L0B52_08215 (tal)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sutr03019
]
L0B52_08215 (tal)
03009 Ribosome biogenesis [BR:
sutr03009
]
L0B52_08215 (tal)
Enzymes [BR:
sutr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
L0B52_08215 (tal)
Messenger RNA biogenesis [BR:
sutr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L0B52_08215 (tal)
Ribosome biogenesis [BR:
sutr03009
]
Prokaryotic type
rRNA processing factors
L0B52_08215 (tal)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
TAL_FSA
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
UJF24307
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All DBs
Position
1705855..1709550
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AA seq
1231 aa
AA seq
DB search
MKRMLINATQQEELRVALVDGQQLYDLDIETLYSTQKKANIYKGKITRIEPSLEAVFVDY
GSQRHGFLPFKEISKEYLTGSTNASDHQPSFKDMIEVGQEVLVQIDKEERGSKGAALTTY
ISLAGRFLVLMPNNPRAGGVSRRIQGDDRKELRDTLDQLDVPDNVGVIVRTAGVGRSQEE
LQWDLDFLLQLWDAISEEYDKATPQRLIYQESNIIVRALRDYLRPDIGQILIDDERVYQQ
AADFMNLVMPSNVHKLKLYQDSIPLFTRYQIEGQIESAYQRNVQLPSGGELVIDYTEALV
SIDINSSRSTKGGDIEETAYQTNLEAADEIARQMRLRDLGGLLVIDFIDMNASRNRKDVE
QRLYDATQIDRARVQIGRISRFGLLELSRQRLRPSIDEASHRVCPRCKGQGSIRGIQSMA
LSLLRLIEEEAMKDRTQRITGELPVSIATYLLNEKRAAVRQIEQRNNVEVVLMPNANLHT
PDYHITRLRDDEVGEDLANTPSYRLPVQKESAEESDAQNTQPVREQAAVQGVVPKVPLPV
AAQSKPDATSKKGLSALFSKVVALFKDDVVSDKQAAAKELADEQSNNQERQSRNNNRSRN
GGRSRNNRQKNRDDNRQDNRQDNRQDQGRQQKSQNDDKGQKDAQKNDKSSNKQAQNGKNR
DDQQNGRNKQQQRKQDNQQERRQNRKAAAQEAAKDEVNPSIEELTNPPSEINGREVRKGR
PRDIHAVRGQGKADYQAAPEDGLGNEQAAVEQQPAKAQKQEKPRPEQPPVKQDAPGMVAM
LNDAPKKDVAAKAEDKPAETAQAEKPKAQAAKVEKTEAPKVNQSADTQSEAKPEAKLDAK
PAPASDKQPAKTVTAKASENPLTALPGLGQSIWFDNIHRRMLADGELTAMIKADDLRGVT
SNPAIFQKAMSDGDAYDAGLKAWLAANEADPREAFFALAIEDIQQACDQMKPVYEKTDGT
DGMVSLEVSPDIAHDADKTVAEALALHKRVARENVMIKVPGTEAGLQAISALTAAGLNIN
VTLLFSVARYQAVLEAYIDGLKQRVADGKSIDMVRSVASFFVSRVDSKVDDALGEEHAGL
RGRAAIANAQLAYAYYLERISHDDWLVLAQKGAAVQRLLWASTGTKNPNYSDVRYVDQLI
GADTVNTVPPATYAAFKDHGKAANTLLRDIDKAPEVMQAVADAGVDVALITADLEREGVA
QFEAAFADLLASLQKKIDSLQPVEETANNDE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttaatcaatgccacgcagcaagaagagctgcgcgtggcgcttgtcgac
ggacaacaactctacgatctcgatatcgaaacgctgtactcaacccagaaaaaagccaat
atttacaaagggaaaattacgcgtatcgagccatctttagaggctgtttttgtcgactac
ggctcacaacgccatggttttctaccgtttaaggaaatcagcaaggaatatctaaccggt
tcaacgaacgccagcgatcatcagcctagcttcaaagatatgattgaagtgggccaggaa
gtgctggtgcagatcgataaagaagagcgcggcagcaaaggcgctgcgttaaccacttat
atttcactcgctggacgttttttggtgctaatgccaaacaatccacgcgccggtggtgtc
tcacgccgtatccaaggcgatgaccgtaaagaactgcgtgatacactcgatcaacttgat
gtgccggacaatgtgggtgttattgtgcgcaccgctggtgtcgggcgttcacaagaagag
ctgcaatgggatctcgatttcctgttgcaattgtgggacgcgatttctgaagaatacgac
aaagccacgccacaacgcctgatttaccaagaaagcaatattatcgtgcgcgctttgcga
gattatctgcgtccggatatcggtcaaattctgattgatgatgagcgcgtctatcagcag
gccgctgattttatgaatctggtcatgccgagcaatgtgcacaagcttaagctttatcaa
gacagcattcctctattcacccgctatcaaatcgaagggcaaatcgaatcggcgtatcag
cgtaatgtgcagttgccgagcggtggcgaattggtgattgactacaccgaagcgttggtg
tcgattgatattaactcatcgcgctcaaccaaaggtggcgacatcgaggaaaccgcgtac
caaaccaaccttgaagcggctgatgagattgcccgacaaatgcgtttgcgcgatttgggc
ggcttgttggtgatcgattttatcgatatgaacgcctcacgcaatcgtaaagatgtggag
cagcgtttgtatgacgccacacaaattgaccgtgcacgcgtgcaaatcgggcggatttcg
cgctttggtttgctcgaactatcacgtcagcgcctgcgtccgtcaattgatgaggcgagt
catcgcgtgtgcccacgctgtaaaggccaaggcagcattcgtggcattcagtcgatggcg
ctgtctttgttgcgtctgattgaagaagaggcgatgaaagaccgtacccaacgtattacc
ggcgaattgccggtgagcattgctacgtatttgcttaatgaaaaacgcgccgcggtgcgt
cagatcgagcagcgtaataatgtcgaagtggtgttaatgccgaacgccaatttacacacg
ccggactaccatatcacgcgtttacgcgatgatgaggtgggcgaagatttagcgaatacg
ccaagctatcgtctgccggtacaaaaagaaagcgccgaagaaagtgatgcgcaaaatacg
cagccagtgcgtgagcaggccgctgtgcaaggggtggtaccgaaagtaccattgcctgtg
gcggcgcaaagcaaaccagatgcgacgagcaaaaaaggcttatccgcgctgttttcgaaa
gtggtggcgttattcaaagacgatgtggtttcagataaacaagcggcagcgaaagaactc
gcagacgaacaatcaaacaaccaagaacgtcaatcgcgcaacaataaccgttcacgcaat
ggtggtcgttcgcgcaataatcgtcagaaaaaccgcgacgataaccgccaggacaaccgt
caagataatcgccaggatcaaggccgtcagcaaaaatcacaaaacgacgataaaggccag
aaagacgcgcagaaaaacgacaaatcgtcgaataaacaggcgcagaatggcaaaaaccgt
gatgaccaacaaaatggtcgcaataaacagcagcagcgcaagcaagacaatcaacaagag
cgtcgacagaatcgcaaagctgctgcccaagaagcggccaaagacgaagtgaatccaagc
attgaagagctcacgaatccgccgagcgaaatcaacggacgcgaagtgcgtaaagggcgt
cctcgtgatatccatgcggtgcgtggtcaaggcaaagccgattatcaggccgcgcctgag
gatggcttaggaaacgagcaagctgctgtagagcagcagccagcaaaggcacagaagcaa
gaaaagccacgccctgaacagccaccagtgaaacaggatgcgccaggaatggtcgcgatg
ctcaatgatgcaccgaagaaggacgtagcagcaaaggccgaggacaaacctgctgaaacc
gcacaagccgagaagcctaaagcgcaagcagcaaaggttgaaaaaacggaagcgccaaag
gtgaatcaaagcgcggacactcaatcagaagctaaacctgaggctaagttagacgccaaa
cctgcgccagcgagtgataaacaacccgctaaaacagtcaccgctaaagcttcagaaaac
ccattaacggcgttacctggcttgggacaaagtatctggtttgataatatccatcgccgc
atgctggccgatggtgaattaactgcgatgatcaaagcagacgatttgcgcggggtcact
tctaacccggcgattttccaaaaagcgatgagcgatggggatgcctacgatgccggctta
aaagcctggttggcggctaatgaagcggatccgcgtgaggcgttctttgcgctcgcgatt
gaggatattcagcaagcctgtgatcagatgaaaccggtgtatgagaaaaccgatggtacc
gatggtatggtttccttggaagtttccccagatatcgcacacgatgcggataagaccgtg
gccgaagcgttagcgctgcataagcgcgtggcgcgtgagaatgtgatgattaaagtgccg
gggactgaagcaggtttgcaagcaattagtgcactcaccgctgctgggctgaacatcaac
gtcaccttgttattctcggtagcgcgttatcaggcagtgcttgaggcctacattgacggc
ttgaagcagcgtgtggctgatgggaagtcgattgatatggtgcgttcggtagcaagcttc
ttcgttagccgtgtcgatagcaaagtcgatgatgcgttaggcgaggaacacgctggcttg
cgtggtcgcgccgcgatcgctaatgcacaattggcttatgcgtattatcttgagcgcatc
agccatgatgattggttggtgcttgcgcagaaaggcgcagcagtgcagcgtttgttgtgg
gcctctaccggtacgaaaaacccgaactattcggatgtacgctatgtcgaccaattaatt
ggcgcggatacggtcaataccgttccacctgccacttacgcggcatttaaagatcatggt
aaagcagcgaacacgctattgcgcgatatcgacaaagcgcctgaagtcatgcaagcggta
gccgatgctggggttgatgtggcgttaattaccgctgatttagaacgcgaaggtgtggcg
caatttgaagcagcatttgctgatttgctcgcctctttgcagaaaaaaatcgattcattg
cagccggtagaagaaacggcaaataacgatgaataa
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