Sutterella megalosphaeroides: SUTMEG_01010
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Entry
SUTMEG_01010 CDS
T05697
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sutt
Sutterella megalosphaeroides
Pathway
sutt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sutt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SUTMEG_01010 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sutt03019
]
SUTMEG_01010 (cshA)
03009 Ribosome biogenesis [BR:
sutt03009
]
SUTMEG_01010 (cshA)
Enzymes [BR:
sutt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SUTMEG_01010 (cshA)
Messenger RNA biogenesis [BR:
sutt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SUTMEG_01010 (cshA)
Ribosome biogenesis [BR:
sutt03009
]
Prokaryotic type
rRNA helicases
SUTMEG_01010 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BBF22210
UniProt:
A0A2Z6I8J6
LinkDB
All DBs
Position
112416..114308
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AA seq
630 aa
AA seq
DB search
MATFSELGLSDDIVSALSQLGFEEPTPIQQEAIPALLDGRDVLGQAATGTGKTAAFGLPL
LDRHVVGAEPDLPLILVLTPTRELCLQVSESFHNFGRNAGIIVTPIYGGQEYGRQIRALK
RGTHVVVATPGRALDHINKGTLDLSALKAIVLDEADEMLDLGFADELDAIFNAVPETVQT
ALFSATLAPRIARIAEEHLKDPVRIQIAREETADGEAPRVPQIAYVVGHNYRLPALGRIL
DLEGPELAIIFTRTRTEVDELTEALRARGWSVEALHGGLDQPTRDRVMKRARAGQVDVIV
ATDVAARGIDLENLTHVVNFGIPASYDTYVHRIGRTGRAGRTGTAITLLEPREHRHLRAI
ERITKSRIEIRSVPSATDVRAHRLEVVRGSVEEVLREGDLERFRVVVETLCEEHDPFDVA
AAAIRLALESEGGVDDDTDIPAFSPFERPKRDRAERGERTERNGRERRDRSAGPEAGMKR
IFFGAGRDVGVRPGDIVGAFANESGIHSRSIGAIDISDRFTLVEVEEAVAERVVEAMQGV
RYKGRNVLVKFDEPRRREERSDRSDRADRGERSDRSDRADRGDRGERFERFGDRTERNER
NDRYDRNDRGDRRGNGRFDRFERNGRGPRR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggccactttttccgaacttggtctttccgatgacatcgtgagcgcgctctcgcagctc
ggtttcgaagaacccaccccgattcaacaggaggcaatccccgcgctgctcgacggacgc
gacgtcctcggtcaggccgccaccggcacgggcaaaaccgcagccttcgggctcccgctc
ctcgaccgccacgtcgtgggcgccgaacccgatctcccgctcatcctcgttctcacgccg
acgcgcgaactctgcctgcaggtgagcgaatcgttccacaacttcggccgcaacgcgggc
atcatcgtcacgcccatttacggcgggcaggagtacggccgccagatccgcgccctgaag
cgcggcacgcacgtcgtcgtcgcgacgcccggccgagcgctcgaccacatcaacaagggt
acgctcgacctctccgccctcaaagcgatcgttctcgacgaagccgacgaaatgctcgat
ctgggctttgccgacgaactcgacgccattttcaacgccgtgcccgaaacggtgcagacg
gcgctcttttccgcgacgctcgccccgcgcatcgcccgcatcgccgaagaacacctcaag
gaccccgtgcgcatccagatcgcccgtgaagaaaccgcggacggcgaagcgccccgcgtg
ccgcagatcgcgtacgtggtgggtcacaactaccgcctgcccgcgctcggtcgcattctc
gacctcgaagggcccgaactcgccatcatcttcacgcgcacccgcacggaagtggacgaa
ctcaccgaagcgctgcgcgcccgcggctggagcgtcgaagccctgcacggcgggctcgat
cagcccacgcgcgaccgcgtgatgaagcgcgcccgcgccggtcaggtcgacgtgatcgtc
gccaccgacgtcgccgcccgcggcatcgaccttgaaaacctcacgcacgtcgtcaacttc
ggcatccccgcctcctacgacacgtacgtgcaccgcatcgggcgaacgggccgcgccggc
cgcacgggtaccgccatcacgctcctcgagccccgcgaacaccgtcatctgcgtgcgatc
gaacgcatcacgaaaagccgcatcgaaatccgctccgtgccctccgccaccgacgtgcgc
gcgcaccgtctcgaagtcgtgcgcggctccgtcgaagaagtgctccgcgagggcgacctc
gaacgcttccgcgtcgtcgtcgaaacgctctgcgaagagcacgatcccttcgacgtggcg
gccgcggccatccgtctcgcactcgagagcgaaggcggcgtggacgacgacaccgacatt
cccgcgttctcgcctttcgagcgcccgaagcgcgatcgcgccgaacggggcgaacggacc
gaacgcaacggtcgcgagcgccgcgaccgctcggccggtcccgaagccggcatgaagcgc
atcttcttcggcgccggccgcgacgtcggcgtgcgcccgggcgacatcgtcggcgccttt
gcgaacgaatcgggcatccactcccgctcgatcggcgcgatcgacatctcggaccgtttc
acgctcgtcgaagtcgaagaggccgtggcggaacgcgtggtcgaagccatgcagggcgtg
cgctacaagggccgcaacgtgctcgtgaagttcgacgaaccgcgtcgccgcgaagaacgt
tcggaccgctccgaccgtgcggatcgcggcgaacgctccgaccgaagcgaccgcgccgat
cggggcgaccgaggcgaacgtttcgagcgcttcggcgaccggaccgaacgcaacgagcgc
aacgatcgctacgaccgcaatgatcgaggcgatcgccgcggcaacggccgattcgaccgg
ttcgaacgcaacggccgcggtccgcgtcgctga
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