Sutterella megalosphaeroides: SUTMEG_05890
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Entry
SUTMEG_05890 CDS
T05697
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sutt
Sutterella megalosphaeroides
Pathway
sutt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sutt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SUTMEG_05890 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sutt03019
]
SUTMEG_05890 (rhlE)
Enzymes [BR:
sutt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SUTMEG_05890 (rhlE)
Messenger RNA biogenesis [BR:
sutt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SUTMEG_05890 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
BBF22698
UniProt:
A0A2Z6ICA7
LinkDB
All DBs
Position
694278..695720
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AA seq
480 aa
AA seq
DB search
MSSFDQFGLDPRILSAIARMGYETPTPIQEKAIPVVLKGGDVMGAAQTGTGKTAGYGLPL
LGRILPKANTSASPARHPVRALILAPTRELADQVSTNLEAYAKDTPLRVGVVYGGVDIRP
QADMLRRGVEVLTATPGRLLDHVAQRSVNLSQVEVVVLDEADRMLDMGFLPDISRILQLL
PASRQSLMFSATFSPEIKKLAKQFLKPDPALIEVARQNQTAETVTQEVFSVTERDKTDVL
IDILKTRGPEGTPLTQAIVFVNAKITCRRLARTLERVGINADSIHGDKTQEERLVALEGF
KSGAIHVLVATDVAARGLDIKELPYVINYDVPYCAEDYVHRIGRTGRAGAKGVATMLATP
ADARLVEAIEKLTKQTFAPVPLTPQPRRRNAQRRAPTGADRVDTPEDERLARERARAYVP
PSQRQRDPIFDMPYLEHAASKPREETPAYFERRETKKRPVAALLGGFRFARSNAKTDANR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccttcgatcaattcggtctcgatccccgcattctttccgccatcgcccgcatg
ggttacgaaacgcccacgcccattcaggaaaaggcgattcccgtggttttgaagggcggc
gacgtgatgggggccgctcagaccggcacggggaagacggccggttacggtctgccgctt
ctcggacgcattctgcccaaggccaacacctcggcttcgcccgcccgtcacccggtgcgc
gcgctgattctcgcgccgacgcgcgaactcgcggaccaggtctcgaccaatctcgaagcc
tacgccaaagacacgccgcttcgcgtgggcgtggtctacggtggggtcgacatccgcccg
caggccgacatgctgcgccgcggcgttgaagttcttaccgccacccccggccgcctgctc
gaccacgtcgcgcagcgctccgtcaacctctcgcaggtcgaagtggtggtgcttgacgaa
gcggaccgcatgctcgacatggggttcctccccgacatctcccgcatcctgcagctgttg
cccgcttcgcgccagagcctcatgttctcggcgaccttctcgcccgaaatcaagaagctc
gcgaagcagttcctgaagcccgatcccgcgctgatcgaagtcgcccgtcagaaccagacg
gccgaaaccgtgacgcaggaagtcttctcggtgacggaacgcgacaagacggacgtcctg
atcgacatcctcaagacgcgcggtcccgaagggacgccgctcacgcaggcgatcgtcttc
gtgaacgcgaagatcacctgccgccgccttgcgcgcacgctcgagcgcgtcggcatcaat
gccgactccatccacggcgacaagacgcaggaagagcgtctggtggcgctcgaaggcttc
aagtcgggcgcgatccacgtgctcgtcgcgaccgacgttgcggcccgagggctcgatatc
aaagagctcccctacgtcatcaattacgacgttccctattgcgccgaagactacgtgcac
cgcatcggccgcacgggtcgtgcgggtgcgaagggcgtggcgacgatgctcgccactccc
gcggatgcgcgtctcgtcgaagcgatcgaaaagctcacgaagcagacctttgctcccgtg
ccgctcacgccccagccccgtcgccgcaacgcccagcgtcgcgccccgaccggcgccgac
cgcgtcgatacgcccgaagacgaacgtctcgcccgcgaacgcgcccgcgcgtacgtgccg
ccctcgcagcgtcagcgcgatccgattttcgacatgccctacctcgaacacgccgcttcg
aagccccgcgaggaaacgcccgcgtacttcgaacgccgcgaaacgaagaagcgccccgtg
gcggcgcttctcgggggcttccgcttcgcgcgatcgaacgcgaagacggatgcgaaccgc
tga
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