Sutterella megalosphaeroides: SUTMEG_20260
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Entry
SUTMEG_20260 CDS
T05697
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sutt
Sutterella megalosphaeroides
Pathway
sutt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sutt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SUTMEG_20260 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sutt03021
]
SUTMEG_20260 (rho)
03019 Messenger RNA biogenesis [BR:
sutt03019
]
SUTMEG_20260 (rho)
Transcription machinery [BR:
sutt03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SUTMEG_20260 (rho)
Messenger RNA biogenesis [BR:
sutt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SUTMEG_20260 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
NACHT
AAA_22
S1CSD-TOTE-2
ATPase_2
AAA
AAA_5
Mor
AAA_19
nSTAND_NTPase5
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BBF24135
UniProt:
A0A2Z6IC17
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All DBs
Position
2613709..2614965
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AA seq
418 aa
AA seq
DB search
MHLSDLKALHVSQLLDMAFALEIDNAQRMRKQELMFAILKKKAKSGEQIFGDGTLEILPD
GFGFLRSPDSSYLASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVRVDTVN
GLPPEALKHRILFENLTPIFPNEQLTLERNLRGDENFTGRIIDMMAPIGKGQRALIVAPP
KSGKTVLLQHIAHAITANHPDCVLMVLLVNERPEEVTEMQRSVKGEVVAATFDEPAVRHV
QVAEMVIEKAKRLAESKKDVVVLLDSITRLARAYNQVIPSSGKVLTGGVDANALERPKRI
FGAARNLEEGGSLTIVGTALIDTGSRMDDVIYEEFKGTGNNEIHLERRLAEKRVYPAINL
NRSGTRREELLLKPEVLQKVWVLRKFLYDMDELESMEFLLDKLKATKNNNEFFELMKR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcatctctcggacctcaaagcgctgcacgtttcgcaactcctcgacatggcgttcgcc
ctcgagatcgacaacgcccagcgcatgcgcaaacaggaactcatgttcgccatcctgaag
aagaaggcgaaatccggcgaacagatcttcggcgacggcacgctcgaaatcctccccgac
gggttcggtttcctgcgcagccccgactcgtcgtatctcgcgagcacggacgacatttac
atttcgccctcgcagatccgtcgcttcaacctgcacacgggcgactcgatcgaaggtgag
gtgcgtacgcccaaggacggcgagcgctacttcgcgctcgtgcgcgtcgacacggtgaac
ggccttccgcccgaagcgctcaagcaccgcatcctcttcgaaaacctcacaccgatcttc
ccgaacgagcagctcacgctcgagcggaacctgcgcggcgacgaaaacttcacgggccgc
atcatcgacatgatggctccgatcggcaaggggcaacgcgcgctcatcgtcgcgcctccg
aagtccggcaaaaccgtgctcctgcagcacatcgcccacgccatcacggccaaccatccc
gactgcgtgctgatggtgcttctcgtcaacgaacgccccgaagaagtgacggaaatgcag
cgctcggtgaagggcgaagtcgtcgccgccacgttcgacgaacccgccgtgcgtcacgta
caggtagccgaaatggtgatcgaaaaagcaaagcgcctcgccgaatcgaagaaggacgtc
gtcgtgctgctcgactcgatcacgcgtcttgcgcgcgcctacaaccaggtgattccctcc
tcgggcaaggtcctcacgggcggggtcgacgccaacgcgctcgaacgcccgaagcgcatc
ttcggcgccgcgcgcaaccttgaagaaggcgggtcgcttacgatcgtcggcacggccctc
atcgacacgggctcccgcatggacgacgtgatctacgaagaattcaagggtacgggcaac
aacgaaatccacctcgaacggcgcctcgcggaaaagcgcgtctatccggccatcaacctc
aaccgttcgggcacgcgtcgcgaagaactgctcctcaagcccgaagtgctccagaaggtt
tgggtcctgcgcaagttcctctacgacatggacgaactcgaatcgatggaattcctcctc
gacaagctgaaggcgacgaagaacaacaacgagttcttcgaactgatgaagcgctga
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