Staphylococcus aureus subsp. aureus VC40: SAVC_05595
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Entry
SAVC_05595 CDS
T01745
Name
(GenBank) phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
suv
Staphylococcus aureus subsp. aureus VC40
Pathway
suv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAVC_05595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suv03019
]
SAVC_05595
Messenger RNA biogenesis [BR:
suv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAVC_05595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
PIGBOS1
KH_2
Motif
Other DBs
NCBI-ProteinID:
AEZ37279
LinkDB
All DBs
Position
1216415..1217974
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AA seq
519 aa
AA seq
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MNLLSLLLILLGIILGVVGGYVVARNLLLQKQSQARQTAEDIVNQAHKEADNIKKEKLLE
AKEENQILREQTEAELRERRSELQRQETRLLQKEENLERKSDLLDKKDEILEQKESKIEE
KQQQVDAKESSVQTLIMKHEQELERISGLTQEEAINEQLQRVEEELSQDIAVLVKEKEKE
AKEKVDKTAKELLATAVQRLAADHTSESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDGRIHPGRIEDMVEKARKEVDDIIRE
AGEQATFEVNAHNMHPDLVKIVGRLNYRTSYGQNVLKHSIEVAHLASMLAAELGEDETLA
KRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYGENETVINAIHSHHGDVEPTSIISILVA
AADALSAARPGARKETLENYIRRLERLETLSESYDGVEKAFAIQAGREIRVIVSPEEIDD
LKSYRLARDIKNQIEDELQYPGHIKVTVVRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttattaagcctcctactcattttgctggggatcattctaggagttgttggaggg
tatgttgttgcccgaaatttgttgcttcaaaagcaatcacaagctagacaaactgccgaa
gatattgtaaatcaagcacataaagaagctgacaatatcaaaaaagagaaattacttgag
gcaaaagaagaaaaccaaatcctaagagaacaaactgaagcagaactacgagaaagacgt
agcgaacttcaaagacaagaaacccgacttcttcaaaaagaagaaaacttagagcgcaaa
tctgatctattagataaaaaagatgagattttagagcaaaaagaatcaaaaattgaagaa
aaacaacaacaagtagatgcaaaagagagtagtgttcaaacgttaataatgaagcatgaa
caagaattagaacgcatctccggtctcactcaagaagaagctattaatgagcaacttcaa
agagtagaggaagaactgtcacaagatattgcagtacttgttaaagaaaaagaaaaagaa
gctaaagaaaaagttgataaaacagcaaaagaattattagctacagcagtacaaagatta
gcagcagatcacacaagtgaatcaacggtatcagtagttaacttacctaatgatgagatg
aaaggtcgaatcattggacgagaaggacgaaacatccgcacacttgaaactttaactggc
attgatttaattattgatgacacaccagaagcggttatattatctggttttgatccaata
agaagagaaattgctagaacagcacttgttaacttagtatctgatggacgtattcatcca
ggtagaattgaagatatggtcgaaaaagctagaaaagaagtagacgatattattagagaa
gcaggtgaacaagctacatttgaagtgaacgcacataatatgcatcctgacttagtaaaa
attgtagggcgtttaaactatcgtacgagttacggtcaaaatgtacttaaacattcaatt
gaagttgcgcatcttgctagtatgttagctgctgagctaggcgaagatgagacattagcg
aaacgagctggacttttacatgatgttggtaaagcaattgatcatgaagtagaaggtagt
catgttgaaatcggtgtagaattagcgaaaaaatatggtgaaaatgaaacagttattaat
gcaatccattctcatcatggtgatgttgaacctacatctattatatctatccttgttgct
gctgcagatgcattgtctgcggctcgtccaggtgcaagaaaagaaacattagagaattat
attcgtcgattagaacgtttagaaacgttatcagaaagttatgatggtgtagaaaaagca
tttgcgattcaggcaggtagagaaatccgagtgattgtatctcctgaagaaattgatgat
ttaaaatcttatcgattggctagagatattaaaaatcagattgaagatgaattacaatat
cctggtcatatcaaggtgacagttgttcgagagactagagcagtagaatatgcgaaataa
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