Staphylococcus aureus subsp. aureus VC40: SAVC_07190
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Entry
SAVC_07190 CDS
T01745
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
suv
Staphylococcus aureus subsp. aureus VC40
Pathway
suv03030
DNA replication
suv03430
Mismatch repair
suv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
suv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAVC_07190 (holA)
03430 Mismatch repair
SAVC_07190 (holA)
03440 Homologous recombination
SAVC_07190 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
suv03032
]
SAVC_07190 (holA)
03400 DNA repair and recombination proteins [BR:
suv03400
]
SAVC_07190 (holA)
Enzymes [BR:
suv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAVC_07190 (holA)
DNA replication proteins [BR:
suv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAVC_07190 (holA)
DNA repair and recombination proteins [BR:
suv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAVC_07190 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
YtxK_like
DUF2018
DisA-linker
YgxA-like_sub_bind
DUF3781
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
AEZ37597
LinkDB
All DBs
Position
complement(1558031..1559005)
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AA seq
324 aa
AA seq
DB search
MSDNIVAIYGDVPELVEKQSAEIISQFLKSDRDDFNFVKYNLYETEIAPIVEETLTLPFF
SDKKAILVKNAYIFTGEKAPKDMAHNVDQLIEFIEKYDGENLIVFEIYQNKLDERKKLTK
TLKKHARLKKIEQMSEEEIKKWIQSKLNENFKDIKRDALDLFIELTGINFNIVSQEIEKL
ILFLGDRPTINKQDVNQIINRSLEQNVFLLTEYIQKRKKEQAIHLVKDLITMKEEPIKLL
ALITSNYRLFYQCKILSQKGYSGQQIAKTIGVHPYRVKLALGQVRHYQLDELLNIIDACA
ETDYKLKSSYMDKQLILELFILSL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaatattgtagctatttatggagatgtgcctgaattggttgaaaaacaaagt
gcagaaatcatatcacaatttttgaaaagtgatagagatgactttaactttgtgaaatat
aatttatacgaaacagagattgcaccaattgttgaagaaacattaacattgcctttcttt
tcagataaaaaagcaattttggttaaaaatgcatatatatttacaggtgaaaaagcgcca
aaagatatggctcataatgtagatcaattaatagaatttattgaaaaatatgatggcgaa
aatttgattgtctttgagatatatcaaaataaacttgatgaaagaaaaaagttaactaaa
actctaaaaaagcatgcaaggcttaaaaaaatagagcaaatgtctgaagaagaaataaaa
aaatggattcaaagtaaattaaatgagaatttcaaagatatcaaaagagatgcattagat
ttatttattgagttgacaggtattaactttaatattgtctcacaagagatagaaaagttg
attttatttttaggcgatagaccaacaattaataagcaggatgttaaccaaattattaat
agaagtttagagcaaaatgtatttttactgactgaatacattcagaaaagaaagaaagaa
caagcaattcatttagtaaaagatttaataactatgaaagaagaaccaattaaattactt
gcactaattacaagtaattaccgattattttatcaatgtaagattctgagtcaaaaagga
tatagtggacagcaaattgctaaaacaataggagtacatccatacagagtaaaattagcg
ttaggacaagtaagacattatcaacttgatgaattattgaatattatagatgcttgtgcg
gaaactgattataaacttaaatcatcatatatggataaacagttaatactggaattattc
attctatctttataa
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