KEGG   Staphylococcus aureus subsp. aureus VC40: SAVC_09990
Entry
SAVC_09990        CDS       T01745                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
suv  Staphylococcus aureus subsp. aureus VC40
Pathway
suv03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:suv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SAVC_09990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:suv03021]
    SAVC_09990
   03400 DNA repair and recombination proteins [BR:suv03400]
    SAVC_09990
Enzymes [BR:suv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SAVC_09990
Transcription machinery [BR:suv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SAVC_09990
DNA repair and recombination proteins [BR:suv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SAVC_09990
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L DUF961 HHH_5 SAM_EPH
Other DBs
NCBI-ProteinID: AEZ38150
LinkDB
Position
complement(2175897..2176841)
AA seq 314 aa
MIEIEKPRIETIEISEDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEG
VLHEFSAVDNVVEDVSTIIMNIKQLALKIYSEEDKTLEIDVRDEGEVTASDITHDSDVEI
LNPELKIATVSKGGHLKIRLVANKGRGYALAEQNNTSDLPIGVIPVDSLYSPVERVNYTV
ENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKIMTEHLNIFVGLTDEAQNAEIMIEK
EEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVK
YKLEDLGLGLRKED
NT seq 945 nt   +upstreamnt  +downstreamnt
atgatagaaatcgaaaaacctagaattgagacaattgaaattagtgaagatgctaaattc
ggtaagttcgttgttgaaccactagaacgtggctacggtactacactaggaaactcctta
cgtcgtatcctactatcttcattaccaggtgcagccgttaagtatattgaaattgaggga
gttttacatgaattctcagcagtagacaatgtagttgaagatgtttctacaattattatg
aacattaaacaattagcattgaaaatttactctgaagaagataaaactttagaaattgat
gtacgtgatgaaggcgaagtaacagcaagcgacattacacatgatagtgatgttgaaatt
ttaaacccagagcttaaaattgcaacagtatctaaaggtggtcacttaaaaattcgtcta
gttgctaacaagggtagaggttacgcattagcagaacaaaataatactagtgatttacca
attggtgtaatccctgttgattcattgtattcacctgttgaacgtgtgaactatactgtt
gaaaatacacgtgtaggtcaaagcagtgattttgataaattaacattggatgtttggact
aatggttcaatcacaccacaagaatcagtttcattagcagcaaaaataatgactgaacac
ttgaatatcttcgttggtcttactgatgaagcgcaaaacgctgaaatcatgattgaaaaa
gaagaagatcaaaaagaaaaagtattagaaatgtctattgaagaattagacttatctgta
cgttcatataactgcttaaaacgcgcaggaatcaattctgttcaagagttagctgacaaa
tctgaagctgacatgatgaaagtgcgtaatttaggtcgtaaatctttagaagaagttaaa
tacaaattagaagatttaggattaggattaagaaaagaagattga

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