Staphylococcus aureus subsp. aureus TW20 (MRSA): SATW20_07960
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Entry
SATW20_07960 CDS
T02060
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
suw
Staphylococcus aureus subsp. aureus TW20 (MRSA)
Pathway
suw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
suw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SATW20_07960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
suw03019
]
SATW20_07960
03400 DNA repair and recombination proteins [BR:
suw03400
]
SATW20_07960
Enzymes [BR:
suw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SATW20_07960
Messenger RNA biogenesis [BR:
suw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SATW20_07960
DNA repair and recombination proteins [BR:
suw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SATW20_07960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
GH123_cat
DUF1033
Motif
Other DBs
NCBI-ProteinID:
CBI48675
LinkDB
All DBs
Position
851598..853379
Genome browser
AA seq
593 aa
AA seq
DB search
MMQQTLSHYFGYETFRPGQEEIISKVLDHRNVLGVLPTGGGKSICYQVPGLLLGGTTIVI
SPLISLMKDQVDQLKAMGIQAAFLNSSLTQKEQQRIEKALSNGEIQFLYVAPERFENRYF
LNMLQRIKIHLVAFDEAHCISKWGHDFRPSYQNVISKVFTLPQDFTIIALTATATVEVQQ
DIREKLNIAQTDQIKTSTKRRNLIFKVNPTYQRQKFILDYIKTHDEDAGIIYCSTRKQVE
ELQEALESQKIESVIYHAGLSNKEREEAQNDFLFDRVKVVVATNAFGMGIDKSNVRFVIH
YNMPGDLESYYQEAGRAGRDGLKSECILLFSERDINLHEYFITVSQADDDYKDKMGEKLT
KMIQYTKTKKCLEATIVHYFEPNEKLEECEQCSNCVQQDKSYNMTQEAKMIISCIARMKQ
QESYSVIIQVLRGESTDYIKYKGYDQISTHGLMKGYTTSELSHLIDELRFKGFLNENDEI
LMCDTSIKKLLSNEVEVFTTPFKQKATEKVFINTVEGVDRVLFSQLVEVRKKLSDKLTIA
PVSIFSDYTLEEFAKRKPASKQDMINIDGVGSYKLKHYCPAFLETIQNYKAKV
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacaaacattatcgcattactttgggtatgaaacgtttcgaccaggacaagaa
gaaattattagcaaagtattagaccatcgtaatgtgcttggtgtcttaccaactggtgga
ggtaagtctatatgctatcaagtaccaggtttattgttaggtggtacaacaattgtaata
agtccactaatatcattaatgaaagatcaagtggatcaattaaaagcgatgggaattcaa
gctgcttttttaaatagtagtttgactcaaaaagagcaacaacgtattgaaaaagcatta
tcaaatggagaaattcaatttttgtatgttgcaccagaacgatttgaaaaccgatatttt
ttaaatatgcttcagcgtataaagattcacttagtcgcgtttgatgaagcgcattgtatt
tctaaatggggtcatgatttcaggccgagttaccaaaatgttatttcaaaagtatttacg
ttacctcaagattttacaataatagcgttgacagcaactgccacggttgaagtacagcaa
gatattagagaaaagttaaatatcgctcaaactgatcaaattaaaacgagtactaagcgt
agaaacttaatttttaaagtaaatcctacttatcaacgtcaaaaatttatattggattat
attaaaacacacgatgaagatgcaggtattatttattgttctacacgtaagcaagttgaa
gagcttcaagaagccttagaaagtcagaaaattgaaagtgttatatatcatgcaggtttg
agcaataaagaaagagaagaagcgcagaatgatttcttatttgatcgtgttaaagtagtc
gttgctacaaatgcttttggtatgggtattgataaatccaatgtacgctttgttattcat
tataatatgcctggagatttagaatcttattatcaagaagcgggtcgtgcaggtcgtgac
gggttgaaaagtgaatgtattttgttatttagcgaacgcgatatcaatttacacgagtat
tttataacagtctctcaagctgatgatgactataaagataaaatgggcgaaaagttaact
aaaatgattcaatatacaaaaacaaaaaaatgtctagaagcaacaattgtccattatttt
gaaccgaatgaaaaattagaagaatgtgaacaatgtagtaattgtgttcaacaagataaa
tcatataatatgacacaagaagctaagatgattattagttgcatcgctcgtatgaaacaa
caagagagttatagtgttatcattcaagtgttaagaggagagtcaacagattatattaag
tataaaggttatgaccaaatttcaacccatggtttaatgaaaggttacacaacatcagaa
ttaagtcacttaatagatgaattaagattcaaagggttcttaaatgaaaatgacgaaata
ttaatgtgtgatacttcaattaaaaaattactcagtaatgaagtagaagtattcacaaca
ccatttaagcaaaaagcgactgaaaaagtatttataaatacggttgaaggggttgaccga
gtattattcagtcagttggtagaagttcgtaaaaagttaagtgacaaattaacgatagca
cctgtaagtatattttctgattacacgttggaggaatttgctaaacgtaagcctgcttcg
aaacaagatatgattaatattgatggcgtaggtagttacaaattaaaacattattgtcca
gcatttttagaaacgattcaaaattataaagccaaagtatag
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