KEGG   Sulfurifustis variabilis: SVA_0027
Entry
SVA_0027          CDS       T05321                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
sva  Sulfurifustis variabilis
Brite
KEGG Orthology (KO) [BR:sva00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sva03016]
    SVA_0027
Enzymes [BR:sva01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     SVA_0027
Transfer RNA biogenesis [BR:sva03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    SVA_0027
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC NNH6
Other DBs
NCBI-ProteinID: BAU46610
UniProt: A0A1B4UZP4
LinkDB
Position
complement(30886..31989)
AA seq 367 aa
MSVQTSLITEPAALADLTAKVAEAPWIALDTEFTRVRTYYARLGLVQIATTGEIACVDPL
ALDIEPLLEALYAPRSLKILHAARQDLEVFYDRRGSVPVPLFDTQIAAALVGHPEQIAYA
SLVEALAGVKLPKLHTRTDWEARPLSTEQLHYAQDDVRFLGALYEELAAELDRRGRAAWL
EEECRALADAALYANDPAVAYQRIKGGHMLTPAGQARLKRLAEWRERTAKSRDLPRGWVA
PDNVLIDLARSAPTDRAALARVRGVTPAVVRTHGEALLDLLHADGKEPGEKLWSDPRPPT
AEEQALLRRLQARVEEAATDAGVAPAVVGGRRAVLELMRGGGGPLARGWRRTLVGHELIG
ILAGTAA
NT seq 1104 nt   +upstreamnt  +downstreamnt
gtgtcggtgcaaactagcctcatcaccgaaccggcggcgctcgcggatctgacagccaaa
gtcgcggaagccccgtggatcgcattggatacggagttcacgcgggtgcgcacctattac
gcacgcctcggactcgtgcagatcgcaacgaccggcgaaatcgcctgcgtggatccgctc
gccctcgacatcgagccgctgctcgaggcgctttatgcgccgcgctcgctcaagatactc
catgccgctcgccaggatctcgaagtgttctacgaccgtcgcgggtcggtgcccgtcccg
ctgttcgacacccagattgcggcggcgctcgtcggtcatcccgagcagatcgcctacgcg
tcgctggtcgaggcgttggcgggcgtgaagcttccgaagctgcacacgcgcacggattgg
gaggcccggccgttgagcaccgagcagctgcattacgcgcaggacgacgtccgcttcctc
ggcgcgttgtacgaggagctggccgccgagctcgaccggcgcgggcgggctgcctggctc
gaggaggaatgcagggcgctcgccgatgcggcgctctacgccaacgacccggccgtcgcc
tatcagcgcatcaagggcgggcatatgctgacgccggccggacaggcgcgcctcaaacga
ctcgcggagtggcgtgagcgcacggccaagtcgcgcgatctgccgcgcggctgggtggca
cccgacaacgtgctgatcgacctggcgcggagcgcgccgacggaccgcgccgcgctcgcc
cgcgtgcggggcgtcacgcccgcggtggtccgcactcacggcgaggccttgctcgacctc
ctgcacgccgacggcaaagagcccggggagaagctttggagtgacccgcggccgccaacc
gccgaggaacaggcgctcctgcgccgcctgcaggcgcgcgtggaggaggccgcgaccgac
gccggtgtcgcccctgccgtggtcggcgggcgacgggccgtactcgagctgatgcgggga
ggagggggaccgctcgcgcgcggctggcgtcgtacgctggtgggtcacgagctgatcggg
atcctggccggcacggccgcctag

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