Sulfurifustis variabilis: SVA_0027
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Entry
SVA_0027 CDS
T05321
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sva
Sulfurifustis variabilis
Brite
KEGG Orthology (KO) [BR:
sva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sva03016
]
SVA_0027
Enzymes [BR:
sva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SVA_0027
Transfer RNA biogenesis [BR:
sva03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SVA_0027
BRITE hierarchy
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
NNH6
Motif
Other DBs
NCBI-ProteinID:
BAU46610
UniProt:
A0A1B4UZP4
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All DBs
Position
complement(30886..31989)
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AA seq
367 aa
AA seq
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MSVQTSLITEPAALADLTAKVAEAPWIALDTEFTRVRTYYARLGLVQIATTGEIACVDPL
ALDIEPLLEALYAPRSLKILHAARQDLEVFYDRRGSVPVPLFDTQIAAALVGHPEQIAYA
SLVEALAGVKLPKLHTRTDWEARPLSTEQLHYAQDDVRFLGALYEELAAELDRRGRAAWL
EEECRALADAALYANDPAVAYQRIKGGHMLTPAGQARLKRLAEWRERTAKSRDLPRGWVA
PDNVLIDLARSAPTDRAALARVRGVTPAVVRTHGEALLDLLHADGKEPGEKLWSDPRPPT
AEEQALLRRLQARVEEAATDAGVAPAVVGGRRAVLELMRGGGGPLARGWRRTLVGHELIG
ILAGTAA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtgcaaactagcctcatcaccgaaccggcggcgctcgcggatctgacagccaaa
gtcgcggaagccccgtggatcgcattggatacggagttcacgcgggtgcgcacctattac
gcacgcctcggactcgtgcagatcgcaacgaccggcgaaatcgcctgcgtggatccgctc
gccctcgacatcgagccgctgctcgaggcgctttatgcgccgcgctcgctcaagatactc
catgccgctcgccaggatctcgaagtgttctacgaccgtcgcgggtcggtgcccgtcccg
ctgttcgacacccagattgcggcggcgctcgtcggtcatcccgagcagatcgcctacgcg
tcgctggtcgaggcgttggcgggcgtgaagcttccgaagctgcacacgcgcacggattgg
gaggcccggccgttgagcaccgagcagctgcattacgcgcaggacgacgtccgcttcctc
ggcgcgttgtacgaggagctggccgccgagctcgaccggcgcgggcgggctgcctggctc
gaggaggaatgcagggcgctcgccgatgcggcgctctacgccaacgacccggccgtcgcc
tatcagcgcatcaagggcgggcatatgctgacgccggccggacaggcgcgcctcaaacga
ctcgcggagtggcgtgagcgcacggccaagtcgcgcgatctgccgcgcggctgggtggca
cccgacaacgtgctgatcgacctggcgcggagcgcgccgacggaccgcgccgcgctcgcc
cgcgtgcggggcgtcacgcccgcggtggtccgcactcacggcgaggccttgctcgacctc
ctgcacgccgacggcaaagagcccggggagaagctttggagtgacccgcggccgccaacc
gccgaggaacaggcgctcctgcgccgcctgcaggcgcgcgtggaggaggccgcgaccgac
gccggtgtcgcccctgccgtggtcggcgggcgacgggccgtactcgagctgatgcgggga
ggagggggaccgctcgcgcgcggctggcgtcgtacgctggtgggtcacgagctgatcggg
atcctggccggcacggccgcctag
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