Sulfurifustis variabilis: SVA_0332
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Entry
SVA_0332 CDS
T05321
Name
(GenBank) type IV secretion protein Rhs
Organism
sva
Sulfurifustis variabilis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PLA2G12
OCRE
DUF4585
Motif
Other DBs
NCBI-ProteinID:
BAU46914
UniProt:
A0A1B4V6L6
LinkDB
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Position
complement(329940..334112)
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AA seq
1390 aa
AA seq
DB search
MQALIAALALLVSLDVFAAQNEHHMGLYGNAPEAAAACKAGYDAGPDYPGYCSDIGCWWK
ENDCSNPVQSSVNFCAAGTGYSVRWALIQRDPYPIAKDGYNYYYCSNSEPVCPNALGDGL
GEGDTYDPNQDKCVPATPPPPCNEDTSRGNPCDAATGSKYETEVDLRASNGLPSVTRSYN
SILAESTGSTLGSGWAISLDNRRLSIFGTSVKIHLPDGRWENFTCNNGTCQGKADSDLRL
AQDASGYTLTHLDGSSERYGIDGALQTEADSAGRTTTYTVDAQGRLIVTGPFGHTLTLAY
DAAGRVDTITDSAGHVIDYTYTAAGTGHNLTRVDYPDDTAKLYHYEDPNFPHHLTGISYV
EANGVVTRYGTYSYDTTGKAYSTEHAGGQERFTLVYDSDTQTTVTDAASTREVMTFEANL
GVKNLVNKVNQGDGKSLVQRFDANNNQTCKKDEEGRVTTYIYNATNQRTSMTEGLTGGCP
TGTATPETRTTTYQYLSPDLDLLTLVESPSVASGQVKRITLAYEDTRFPLLPTAITQSGY
KPDGTPVSRRVGLAYNDDGQLWTIDGPRTDVADVTTFAYYDCTTGAACGQLSSVTNALGQ
VTTYDLYDGNGRVTQLTDPRGIRTEYEYDLRGRVTKIKETNGSGVSRTTEYSYYASGKVK
TYKDPDGVTLTYVYYDSQDLYSVTDNLGNQIRYAYDTRGNRRQAYTYDPQGALKQTLDTD
YDLRNRVETLTHGGSITRQVHDAIGNLVSETDPNLNPATVHHYDALNRLYETIDRMAKVT
TYGYDVNDRLTRVTAPKSASETVTTQYVYDDLGNLLQEISPDRGTMTYTHDEAGNVLTQT
NALSQVTTYTYDALNRPLTQTSSATNTPAYSYAYDTCGAGLLCQIMRNGGFHLYFGYDAW
FRQDYELAVTGLYSFASYSLGGRLNQLRYPSGRRVDYTYDAAGQVTEVSTTLNGQTTALA
SGIAYYPFGPVASLTLGNGLAQSYELDLAYRSTYDHADPYAKDIERDANGNVTFLIDPDT
TRQEFGYDALDRLAAATDTAGTYAALGYTYDDNGNRLTETRAGDTTDYGYGTNTNRLTSV
GGQSRVVNAVGNTVYIPGTGLLAYDGYGRLLSAQGQGATYFYDPFNRRLRKNVNGAITSF
HYLPGGELLIESSGGTSREYVYLNGAPLARIDGEFVYYFHTDHFGTVRAMTDAAGNTIWA
QAGEPFGAATAIGVVDNNLRFPGQYYDQETGLHYNWNRYYDPKTGRYVTSDPVGLTGGLN
TYLYVKANPLRWIDPLGLDITGDWEPEGSVGRPSIPYGLPGSAGSICGSGFKFPEFGFRD
ACQKHDDCYGTCGTNKTWCDFQFQWNARQSCPVGDWRCLLLAEAYFEGVLHGGGGAYAQA
QEEACTECKK
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcccttattgcggccttggcgctattggtttcgctcgatgtctttgctgcgcag
aacgaacatcatatgggtctgtatgggaacgcaccggaagcagcggcggcgtgtaaagca
ggatatgacgcgggtcccgactatccgggatactgctctgacattgggtgctggtggaaa
gaaaacgattgctcgaaccccgtacagtcgagcgtgaatttttgcgcagccggcaccgga
tactcggtacgttgggcacttatccagcgggacccgtatccgatagccaaggacgggtat
aattactattactgctccaatagcgaacccgtttgtcctaatgcattaggcgacgggctg
ggtgagggcgacacctacgacccgaatcaagacaagtgcgtgcctgccacgcctccgccc
ccctgcaatgaagatacctctagaggcaacccctgcgacgccgcgacggggagcaagtac
gaaaccgaagtcgacctcagggccagcaatggattgccctccgttactcgctcttacaac
agtattctcgctgaaagtaccggctccacgctcggctctggctgggcgatatccttagac
aaccggcggctctcaattttcggaaccagcgtcaagattcatctgcccgatggtcgctgg
gagaacttcacctgcaataacggaacctgtcagggcaaggccgattccgacttgcgactt
gcgcaggacgccagcggttacacactcacccacctggacggctccagcgaacgctacggc
attgacggcgccctgcaaactgaggccgactcggcgggacggacgaccacttacacggtc
gatgcccaggggaggctgatcgtcaccgggccattcggtcacacgctgacgctggcctat
gacgccgccggccgagtggacaccatcaccgattcggccggacacgtcatcgactacacc
tacacggcagccggcaccggtcacaacctcacccgcgtcgattaccccgacgacaccgcg
aagctctaccactacgaagaccccaacttcccgcatcacctgaccggcatctcgtatgtc
gaagccaacggcgtcgtcacccgctacggtacctacagctacgacacgaccggcaaggcg
tactcgacggagcacgccggcggccaggaacgcttcacgctcgtgtacgactcggacacg
cagaccaccgtgaccgacgccgccagcacccgggaggtcatgaccttcgaggcgaacctg
ggagtgaagaacctcgtgaacaaggtgaaccagggcgacggcaagtctctggtccagcgg
ttcgatgccaacaacaaccagacctgcaagaaagacgaggaagggcgcgtcaccacttac
atttacaacgccacgaaccagcgcacgtccatgaccgaggggttgacgggcgggtgtccg
acgggcaccgccaccccggagacacgcaccacgacgtatcagtacctctcgcccgatctc
gacctcctcacgctcgtcgagtccccgagcgtcgcgtccggccaggtcaagcggataact
cttgcctacgaggatacgcgcttcccgctgctgccgaccgcgatcacccaatccggctac
aagccggacggcaccccggtctcgcgccgcgtcggccttgcgtacaacgacgacggccag
ctttggaccatcgacggcccgcgcaccgacgtcgccgacgtcaccacgttcgcctattac
gactgcacgaccggcgcggcgtgcgggcagctgagctcggtcaccaacgccctcgggcag
gtcacgacctacgacctctacgacggcaacggacgcgtcacgcagctgaccgacccccgg
ggcatccgcacggagtacgagtacgacctgcgcgggcgcgtgaccaaaatcaaggagacg
aacggcagcggcgtttcccggaccaccgagtacagctactacgcgtccggcaaggtcaag
acgtacaaggatcccgacggcgtgacgctcacgtacgtctactacgactctcaggacctc
tacagcgtcaccgacaacctcgggaaccagatccgctacgcctacgacacccgcggcaac
cgccggcaggcctacacctacgacccccagggggcgctcaagcagacgctcgacaccgat
tacgacctgcgcaaccgggtcgagaccctaacccacggcggctccatcacccggcaggtc
cacgacgcgatcggcaacctcgtctccgagaccgacccgaacctgaacccggcgacggtc
caccattacgacgccctgaaccggctgtacgagaccatcgaccgcatggcgaaggtcacg
acctatggctacgacgtgaacgaccggttgacgcgggtgaccgcgccgaagagcgcgagc
gagacggtcacgacgcagtacgtctacgacgacctcggcaacctcctccaggagatctcg
ccggaccgggggacgatgacctacacccacgacgaagccggcaacgtcctgacccagacc
aacgccctttcccaggtcacgacctacacctacgacgccctgaaccgtccgctcacccag
acgagctcggcgaccaacacgcccgcgtacagctacgcctacgacacctgcggcgccgga
ctgctctgccagatcatgcgcaacggcggcttccacctctacttcggctacgacgcgtgg
ttccggcaggattacgagctggcggtgaccgggctctacagcttcgcgagctactccctc
ggcggccggttgaaccagctgcgctacccgagcgggcgccgggtcgattacacctacgac
gcggccggacaggtcacggaggtgagcaccacgttgaacggccagacgaccgccctcgcg
agcggcatcgcctactaccctttcgggccggtcgcgagcctgacgctcggcaacggcctc
gcgcagagctacgagctcgacctcgcctaccgctcgacctacgaccatgccgatccctac
gcgaaggacatcgagcgggacgcgaacggcaacgtcacgttcctcatcgatcccgatacc
acccgccaggagttcggctacgacgcgctcgaccgcctggccgccgctaccgataccgcc
ggtacgtacgccgcgctcggctacacctacgacgacaacggcaaccgcctgaccgagacc
cgggcgggcgacacgaccgactatggctacggcacgaacaccaaccgcctgacgtcggtc
ggcggccagtcgcgcgtggtcaacgccgtcggcaacaccgtttatatccccggtacgggg
ctgctcgcctacgacggctacggccggctcctgtcggcccagggccagggcgcgacctac
ttctacgatcccttcaaccggcggctgcgcaagaacgtcaacggcgcgatcacgagcttc
cactacctccccgggggcgagctcctgatcgagagcagcggcggaacctcaagggagtac
gtctacctgaacggcgcgccgctcgcccggatcgacggggagttcgtgtactacttccac
accgaccacttcggcacggtacgagcgatgaccgacgcggcggggaacaccatctgggcg
caggccggggagccgttcggggcggcgacagcgatcggggtggtcgacaacaacttgcgg
ttcccggggcagtattacgatcaggagacggggctgcattacaactggaatcggtattac
gatccgaagacggggcggtatgtcacgagtgatccggttgggttaacgggtggacttaac
acgtacctctatgtgaaggccaatccgttgagatggattgaccctctcgggctagatatt
acaggcgactgggagccggaagggtcggtcggacgcccaagcattccttatggtctacca
ggatcagcaggaagcatttgtggatcaggattcaagtttcccgaatttggttttcgcgat
gcctgccagaagcatgacgactgctatggtacgtgcggcactaataagacttggtgcgac
ttccagttccagtggaatgcgcggcaaagttgcccagtgggcgactggcgctgtctgttg
cttgccgaagcgtatttcgagggcgtgcttcacggcggaggtggtgcatatgctcaagct
caggaggaggcttgcacagaatgcaagaaatga
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