Sulfurifustis variabilis: SVA_0998
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Entry
SVA_0998 CDS
T05321
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sva
Sulfurifustis variabilis
Pathway
sva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SVA_0998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sva03400
]
SVA_0998
Enzymes [BR:
sva01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SVA_0998
DNA repair and recombination proteins [BR:
sva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SVA_0998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
Viral_helicase1
UvrD_C_2
AAA_11
UvrD-helicase
SH3_13
Helicase_RecD
SLFN-g3_helicase
AAA_22
UvrD_C
AAA_16
nSTAND3
AAA_28
AAA
AAA_24
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
BAU47577
UniProt:
A0A1B4VDA0
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All DBs
Position
1004642..1006462
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AA seq
606 aa
AA seq
DB search
MSDRLESLRERLALTELDLHFARFLAALDGRGDEDVALAACLVSQATGSGHVCLDLREWT
GEVAPSLGVGIPALARWIAALRASRVVGRPGEMRPLVLDEGDRLYLHRYWDYERTLALEL
GRRAEPAEDVDEDRLRDGLDRLFPRREPGTDWQKVAAAVAVLRRLCVISGGPGTGKTTTV
VRILALLLAQRAGAARAPALALAAPTGKAAARMQDAVRAAKQSLELAPGIAQAIPEEAAT
LHRLLGARPGSSYFRHHRDNPLPFDVVVVDEASMVDQALMTKLASALPPSARLILLGDKD
QLASVESGAVLADLCGGAVGCSPPFAARIERVTGEAIATAPTGPALRDSIVHLRRSYRFG
RESGIGRLAELVRTGEGDAALALLESGECPDLAWRPIESPEALARAAGTELAVRFSGYLA
EVQAQHPLEDALAAFNAFRVLCAHRTGPSGAVTLNRLIEHGLRARRLADTRRPWYPGRPV
MVARNDYNLRLYNGDVGIAVRDAQGESVVFAQPDHGVRRLAPSRLPEHETVYAMTVHKAQ
GSEFDAVLLVLPGEVSRAVSRELVYTAITRARSRIEIWGAPAVFRAGVGRRVQRSSGLRD
RLWKDG
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaccggctcgaatccctgcgcgagcgtctcgctctcacggagctcgatctgcac
ttcgcgcgcttcctggccgcgctcgacggacgcggcgacgaggacgtcgcgctcgcggcg
tgcctcgtgagccaggcgaccgggagcgggcacgtgtgtctcgatctccgagagtggacc
ggcgaggtggcgcccagcctcggtgtcggcatccccgcgcttgcgcgctggatcgcggcg
ctgcgcgcgagccgggtggtggggcggcccggcgagatgcgcccgctcgtgctggacgag
ggcgaccgcctctatctccaccgctactgggactacgagcgcacgctcgcgctcgagctc
gggcgccgggcggagccggcggaggacgtcgacgaagaccggttgcgcgacggtctcgat
cgcctgtttccgcggcgcgagcccggcacggactggcagaaggtggcggcggcggtggcg
gtgctgcgccggctctgcgtgatctccggcggcccgggtaccggcaagaccacgacggtg
gtgcgcatcctcgcgctcctgctcgcgcaacgggcaggcgccgcccgcgcgcccgcgctc
gcgctcgccgccccgaccggcaaggcggccgcgcgcatgcaggatgcggtgcgcgcggcg
aagcagtcgctcgagcttgcgcccgggatcgcgcaggccatcccggaagaggcggcgaca
ctgcaccggctgctcggcgcgcggccgggctcgtcgtatttccgccatcatcgcgataac
cccctgccgttcgacgtggtcgtggtcgacgaggcctcgatggtcgatcaggcgctgatg
accaagctcgcgtcggccctcccgccctcggcccgcctgattctgctcggcgacaaggat
cagctcgcgtcggtcgagtccggtgcggtgctcgccgacctctgcggcggcgcggtgggc
tgctcgccgcccttcgccgcccggatcgagcgggtgaccggcgaggcgatcgcgaccgcg
ccgaccgggcccgcgctgcgcgactcgatcgtccatctgcgacgcagttaccgcttcggg
cgcgagagcggcatcggtcggctggccgagctcgtgcgtaccggcgaaggcgacgcggcg
ctggcgctgctcgagagcggggaatgccccgatctcgcgtggcgtccgatcgagtcgccg
gaggcgctcgcccgtgcggcgggcaccgagcttgcggtgcgcttcagcggctacctcgcc
gaggtgcaggcgcagcacccgctcgaagacgcgctcgccgcgttcaacgccttccgggtg
ctgtgcgcgcaccgcaccgggccgtcgggcgcggtgacgctcaaccggctcatcgagcac
ggcctgcgcgcacgacggctcgcggacacgaggcgcccctggtacccggggcggccggtc
atggtcgcgcgcaacgattacaacctgcggctgtacaacggcgatgtggggatcgccgtg
cgggacgcgcagggcgagagcgtggtcttcgcgcagcccgaccacggcgtgcgccggctc
gcgccgtcgcgtctgcccgagcacgagacggtgtacgccatgaccgtgcacaaggcgcaa
gggtccgagttcgacgccgtgctgctcgtgctgcccggcgaggtatcgcgggcggtgagc
cgcgagctggtctacaccgcgatcacccgcgcccgttcgcgcatcgagatctggggcgcg
ccggcggtgttccgcgccggggtgggacggcgcgtgcagcggtcctcgggactgcgcgac
cggctttggaaagacggatga
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