Sulfurifustis variabilis: SVA_1317
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Entry
SVA_1317 CDS
T05321
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
sva
Sulfurifustis variabilis
Brite
KEGG Orthology (KO) [BR:
sva00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sva01011
]
SVA_1317
Enzymes [BR:
sva01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SVA_1317
Peptidoglycan biosynthesis and degradation proteins [BR:
sva01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SVA_1317
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
NMB0315_dom_I
LysM_OapA
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
BAU47885
UniProt:
A0A1B4V3E8
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All DBs
Position
complement(1318039..1319526)
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AA seq
495 aa
AA seq
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MFGLTVTLIVSGCSTFSADSKKTAASQPELAPSVPVSPVLAVPRKDDAAPSAVVSSPNPL
SDDASLVVPNDDAVASTETPDSTDAADNDLWSRIRNGFRIPKLESPLIAQHERWFTENAE
FREAMFDRSKLYLYFIVEEVEKRGMPMEIALLPAIESAYKPYAYSRAKASGLWQFIPSTG
KLYGLKMNWWYDGRRDVIAATRAALDYLQKLHDDFDGDWHLAIAAYNAGEGRVMRAIDWN
RKRGLPTTYEHLRKLKPETKHYVPKLMAMVNLVSDPARYGVALPEIPNEPYFVKVDVGSQ
VDLGVIARLTDMEAQELHYINAGYMRWATDPDGPHRLLVPVDKKDVLLAGLSSLPEKERV
QWRHHQVRRGDTLHGIARRYNISVSAIKTANKLRTSLLRVGQSLLLPVSSSAPAAGSARA
APVRAAARSGQPLIHRVRRGDTLYGIARRYNVLVQQIAEWNVLDPSDVLRLGQKLKIFPA
SRPSAHQQQIAPVYA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
ttgttcggcctcacggtcacgttgatcgtgtcgggctgcagcaccttttccgccgactca
aaaaagaccgccgcttcgcaaccggagctggcgccctcggtgccggtatcacccgttctc
gccgtaccccggaaagacgacgccgcaccttcggcagtcgtttcttccccgaacccgctc
agtgacgatgcgtcgctcgtcgtcccgaacgacgacgccgtggcttcgacggaaacgccg
gattcgacggatgcggccgataacgacctctggtcgcgcatccgcaacggtttccggatc
cccaagctcgagagcccgctcatcgctcagcacgagcgctggttcacggagaacgccgag
ttccgcgaggcgatgttcgaccggtcgaaactttacctttacttcatcgtcgaggaagtc
gagaagcgcggcatgccgatggaaatcgcgctccttcccgccatcgaaagcgcctataag
ccgtacgcatattcgcgcgcgaaggccagcggcttgtggcagttcatcccttcgaccggc
aagctctacggactcaagatgaactggtggtacgacggacggagggacgtgatcgccgcg
acccgggcggcgctcgactatcttcagaagctgcacgacgacttcgacggcgactggcat
ctcgccatcgcggcgtacaacgccggcgaggggcgggtgatgcgcgcgatcgactggaac
cgcaagagaggcctcccgaccacgtacgagcacctgcgcaagctcaagcccgaaacgaag
cactacgtgccgaagctcatggcgatggtcaatctggtctccgatccggccaggtacggc
gtagcgctgcccgaaatccccaacgagccgtatttcgtgaaggtcgacgtgggctcgcag
gtcgatctcggcgtgatcgcccggttgaccgacatggaagcgcaggagctgcactacatc
aacgccggctacatgcgctgggcgaccgatccggacgggccgcaccgcttgctcgtgccg
gtggacaagaaggacgtgctgctcgccggcctgagcagcctgccggagaaggaacgcgtc
cagtggcgccatcaccaggtccggcgcggcgacacgctgcatggcatcgcgcgtcgctac
aacatctcggtgtccgccatcaagacggcaaacaagctgaggaccagcctgctgcgcgtc
gggcaatcgcttctgcttccggtctcgtcgagcgcgccggccgcaggatccgctcgcgcg
gctcccgtccgcgcggcggcccgctccggccagcccctgatccatcgcgtccgccgcggc
gacacgctctacggtatcgcgcgtcgctacaacgtgctggtgcagcagatcgcggagtgg
aacgtgctcgacccgtccgatgtccttcgcctcggccagaagctcaagatcttcccggct
tcgcgcccctcggcacatcagcagcagatcgccccggtctacgcctga
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