Sulfurifustis variabilis: SVA_1643
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Entry
SVA_1643 CDS
T05321
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sva
Sulfurifustis variabilis
Pathway
sva03030
DNA replication
sva03430
Mismatch repair
sva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SVA_1643
03430 Mismatch repair
SVA_1643
03440 Homologous recombination
SVA_1643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sva03032
]
SVA_1643
03400 DNA repair and recombination proteins [BR:
sva03400
]
SVA_1643
Enzymes [BR:
sva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SVA_1643
DNA replication proteins [BR:
sva03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SVA_1643
DNA repair and recombination proteins [BR:
sva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SVA_1643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Stn1
Motif
Other DBs
NCBI-ProteinID:
BAU48203
UniProt:
A0A1B4V3U2
LinkDB
All DBs
Position
1672289..1675744
Genome browser
AA seq
1151 aa
AA seq
DB search
MTAPFVHLRVHSEYSLTDGIVRIPDLVKATAEAGMPAVALTDLGNVFAGVKFYQAAVAAG
VKPIIGADLWVANSGDAHKPLRLTLLCQNREGYQNLSRLLTRAYLEGQHTGRPCIAREWL
EGLSGGLIALSGGHEGDIGAALLAANGVAARVLAADYVAWFPGRFYLELQRTGQPRQEEY
NHLAVAFAGETGLPVVATNPVVFLQRDEFQAHEIRVCIQEGRILADSRRPRRYTTQQYFR
SAAEMAELFADVPEACANTLEIARRCNFRLEFGRYYLPAFPVPEGMTIDELLIREARVGL
DRRLSKLPDAERTVKEPAYRDRLEMEIEVIAKMGFSGYFLIVADFIRWAKENDVPVGPGR
GSGAGSLVAYSLGITELDPIKYELLFERFLNPERISMPDFDVDFCMERRDRVIEYVQSRY
GADHVSQIITHGTMAARAVVRDVGRVLDHSYGYCDKIAKLIPAAPGQEITLEDALRQEPL
LKERYDREEDVRALIDSARALEGLARSAGKHAAGVVIAPGPLTDFMPLYCEAGNPLTVTQ
FDMIDIEALGLVKFDFLGLRNLTIIDHALKIINAERATRGEPPIVIEDLPLDDATTYSLI
KSARTTALFQLESRGMKELITRLKPDKFEEIVALVALFRPGPLQSGMVDDYINRKHGRTA
VKYPHPSLEAILKPTYGVILYQEQVMQIAQVLSGYTLGGADLLRRAMGKKKPEEMAKQRD
VFVKGAEGRGVNAKLAADIFDLIEKFAGYGFNRSHSAAYALIAYQTAWLKAHYPAAFMAA
VLSSDMDKTDKVVTMIAECRDMRLNVIPPDINRCQYAFVPVDDKTVLYGLGAIKGLGQSA
IEGILQTREEGGPFRDLFDLCRRIDARRVNRRVLESLIKAGALDALGTHRAALMASLTKA
VADADQHSRNVATGQSDLFGAGPAPSEALAYEAVPEWSEDQRLEGEKETLGLYLTGHPIN
RYADELKRITSATIAELKPTQDRAVVVAGLVVGMRIMQTRRGDRMAFITLDDRTGRLELA
VFSELFERNRDLLVKDTLLIVEGHVAVDEYTGGFKMSAEKLYNIEQARAAFGSRVVIELD
AGIAGNGFVDELREILAPASQGPCPVHLRYRSDAAEAEIVLGEEWRIRPSSAVLERLARL
AGERNVRLVYR
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcgcccttcgtccatctccgggtacattccgaatattcgctgaccgacggcatt
gtgcgcatccccgacctcgtgaaggcgacggcagaggcgggcatgccggcggtagcgctc
accgatctggggaacgtcttcgccggggtcaagttttaccaggcggcggttgcggccggc
gtcaagccgatcataggggccgacctctgggtggcgaactccggcgatgcccacaagccg
ctgcgcctcacgctgctttgccagaaccgggaaggctatcagaacctgtcgcggctgctc
acgcgcgcctatctcgaaggtcagcacaccgggcggccgtgcatcgcgcgtgaatggctg
gaaggtctttccggcggcctgatcgccctgtcgggcggacacgagggcgacatcggggca
gcgctcctcgccgctaacggcgttgccgcgcgtgtccttgccgccgactacgtggcgtgg
tttcccggccggttctacctcgagctgcagcgcaccggacaaccgcgccaggaagagtac
aaccatctcgccgtcgccttcgccggcgagacgggcctgccggtcgtcgcgaccaatccg
gtggtgttcctgcagcgcgatgaattccaggcgcacgagatccgcgtgtgcatccaggag
gggcgcattcttgcggacagccgccgcccgcggcgctacacgacgcagcagtactttcgc
agcgcggccgagatggcggagcttttcgccgacgtgcccgaggcctgcgccaacacgctc
gagatcgcgcggcgctgcaacttcaggctcgagttcgggcgctactaccttcccgcgttc
cccgtccccgagggaatgaccatcgacgagctcctgatccgcgaggcccgggtagggctc
gaccgaagactgtcgaagctgccggacgccgagcgaaccgtcaaggagccggcctaccgc
gaccggctggagatggagatcgaggtcatcgcgaaaatggggttctccggctacttcctg
atcgtcgccgacttcatccgctgggccaaggagaacgacgtgccggtcgggcccggtcgc
ggctcgggggcgggctcgctcgtcgcgtacagcctcgggatcaccgagctcgatccgatc
aagtacgagctgctcttcgagcgcttcctgaaccccgagcgtatctccatgccggacttc
gacgtggacttctgcatggagcggcgggaccgggtcatcgagtacgtgcagtcgcgctac
ggcgccgaccacgtttcgcagatcatcacccacggcacgatggcggcgcgcgcggtggtg
cgtgacgtcgggcgcgtgctcgatcattcctacggctactgcgacaagatcgcgaagctg
atcccggccgcgcccgggcaggaaatcacgctcgaggacgcgctcaggcaggagccgctg
ctcaaggagcgctacgacagggaggaggacgtgcgcgcgctcatcgacagtgcccgcgcg
ctcgagggtctcgcgcgcagcgccggcaagcacgcggccggcgtcgtcatcgcgcccggc
ccgctcaccgacttcatgccgctctactgcgaagccgggaacccgctcacggtcacgcag
ttcgacatgatcgacatcgaggcgctcggcctcgtgaagttcgacttcctgggccttcgc
aacctcacgatcatcgaccacgcgctcaagatcatcaacgcggagcgcgcgacgcgcggg
gagccgccgatcgtgatcgaggacctgccgctcgacgacgcgacgacctactccctcatc
aagtctgcgcgcacgacggcgctgttccagctcgagtcgcgcggcatgaaggagctgatc
acgcgcctgaagcccgacaagttcgaggagatcgtcgcgctggtcgcgctgttccgcccg
ggcccgctccagtcgggcatggtcgacgactacatcaaccgcaagcacgggcgcacggcc
gtcaagtatccgcatcccagtctcgaggcgatcctcaagcccacctacggcgtcatcctg
taccaggaacaggtgatgcagatcgcgcaggtactctcgggctacacgctcggcggtgcc
gacctgctgcgccgcgccatgggcaagaagaagcccgaggagatggcgaagcagcgcgac
gtgttcgtgaagggcgcggagggtcggggcgtgaacgccaagctcgcggccgacatcttc
gacctgatcgagaagttcgcgggatacggcttcaaccgatcgcattccgcggcgtacgcg
ctcatcgcgtaccagacggcgtggctcaaggcgcattacccggcggcgttcatggcggcg
gtgctctcgtccgacatggacaagaccgacaaggtcgtcacgatgatcgccgagtgccgg
gacatgcggctgaacgtgatcccgcccgacatcaaccggtgccagtacgcgttcgtgccc
gtcgacgacaagaccgttctctacgggctcggggcgatcaaggggctgggccaatcggcg
atcgaaggcatactccagacgcgcgaagagggcggacccttccgtgacctgttcgacctt
tgccggcgtatcgacgcccggcgcgtcaaccggcgcgtgctcgagtcgctcatcaaggcc
ggcgcgctggacgcgctcgggacccaccgggcggcgctcatggcctcgctcaccaaggcg
gtcgcggacgcggatcagcacagtcggaacgtcgccacggggcagtccgatctcttcggg
gccggtccggcgccgagcgaggcgctcgcctacgaggcggtgccggagtggagcgaggac
cagcgcctggagggcgagaaggagacgttgggcctctacctgaccgggcacccgatcaac
cggtatgccgacgagctcaagcgcatcaccagcgccacgatcgccgagctcaagcccacg
caggaccgggcggtcgtcgtcgccggcctcgtcgtcggaatgcgcatcatgcagacccga
cggggcgaccgtatggcgttcatcaccctggacgaccggaccggccggctcgagctcgcc
gtcttctcggagcttttcgagcgaaaccgcgatctcctggtgaaggacaccctgctgatc
gtcgaggggcacgtggccgtcgacgagtataccggcggtttcaaaatgtccgcggagaag
ctctataatatcgagcaggcgcgcgcggccttcggttcccgcgtggtcatcgaactggac
gcgggaatcgcggggaacggctttgtcgacgagctccgggagattctcgcacccgcaagc
caggggccatgcccggtacaccttcggtaccgaagcgacgccgcggaggccgaaatcgtg
ctgggcgaggagtggaggatacgccccagcagcgcggtactcgagcgactggcgcgcctc
gccggcgagcgcaacgtccgtctggtctaccgctga
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