Sulfurifustis variabilis: SVA_2663
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Entry
SVA_2663 CDS
T05321
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sva
Sulfurifustis variabilis
Pathway
sva03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sva00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SVA_2663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sva03019
]
SVA_2663
03400 DNA repair and recombination proteins [BR:
sva03400
]
SVA_2663
Enzymes [BR:
sva01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SVA_2663
Messenger RNA biogenesis [BR:
sva03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SVA_2663
DNA repair and recombination proteins [BR:
sva03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SVA_2663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAU49211
UniProt:
A0A1B4VCF9
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All DBs
Position
complement(2716858..2718702)
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AA seq
614 aa
AA seq
DB search
MDDARHILHSVFGYERFRGHQEEVIATLLAGRDALVLMPTGGGKSLCYQIPAIARPGTGI
VISPLIALMQDQVAALTQAGVPAAFLNSTQAPNAQREVERQLLRGDLDLLYVAPERLTLE
RTLEMLAGARLALFAIDEAHCVSQWGHDFRPEYMQLSVLHERFPDVPRIALTATADEPTR
REIVARLKLEDARVFVSSFDRPNIRYRIGQGGNAREQLLRFIREEHAGDAGIVYCLSRRR
VDETAEWLAERGYTALPYHAGLEPAVRAANQARFLNEEGVIMVATIAFGMGIDKPNVRFV
AHLNLPKSIEAYYQETGRAGRDGLAADAWMTYGLQDVILLRQMLEASDADDAHKRVERHK
LDAMLAFCELTTCRRQALLGYFGETAPRPCGNCDTCLDPPETWDATVPAQKALSCVHRTG
QRFGVSYLVDVLLGKDDDRIRRFGHDALSTYGIGKELDANAWRGVFRQLIARGLLAVDIE
GHGGLRLTEGSRAVLRGEERLWLRREAKPERTRKAKAAREAHGAFTAEADVRLWEALRTR
RLELAREKGVPPYVVFHDATLAEMVERRPRTLEALSHISGVGERKLAAYGDDFLAVIRTH
AAESEPIEATAPAS
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgcccgccacatcctgcacagcgttttcggctacgaacggttccgcggacac
caggaggaggtcatcgcgacgctcctcgccgggcgggacgccctggtgctcatgccgacg
ggcggcggcaaatcgctgtgctaccagatcccggcgatcgcccgccccggcaccggcatc
gtgatctcgccgctcatcgcgctcatgcaggaccaggtggcggcgctcacgcaggcgggc
gtgcccgcggcgttcctcaactcgacgcaggcccccaacgcgcagcgcgaggtcgagcgc
cagctgctgcgcggcgacctcgacctgctctacgtcgcgcccgagcgcctgaccctggag
cgcacgctggagatgctcgccggcgcccggctcgcgctcttcgccatcgacgaggcgcac
tgcgtctcgcagtgggggcacgacttccgcccggagtacatgcagctttccgtgctgcac
gagcgcttcccggacgtcccccggatcgcgctcacggcgacggccgacgagcccacgcgc
cgggaaatcgtcgcgcgcctcaagctcgaggacgcccgcgtcttcgtgagcagcttcgac
cgcccaaacatccgctaccgcatcgggcagggcggcaacgcgcgcgagcagctcctgcgc
ttcatccgcgaggagcacgcgggcgacgccggcatcgtctactgcctgtcgcgccggcgc
gtggacgagaccgccgaatggctcgcggagcgcggctacacggcgctgccgtaccacgcc
ggcctcgagcccgccgtccgggccgccaaccaggcgcgcttcctgaacgaggagggcgtg
atcatggtcgcgaccatcgccttcggcatgggcatcgacaagccgaacgtccgcttcgtc
gcgcacctcaacctcccgaagagcatcgaggcgtactaccaggagaccggccgcgcggga
cgcgacggcctcgcggcggatgcctggatgacctacgggttgcaggacgtgatcctcctg
cgccagatgctcgaggcctcggacgccgacgacgcgcacaagcgggtcgagcgccacaag
ctcgacgcgatgctcgccttctgcgagctcaccacctgccgccggcaggcgttgctcggc
tacttcggcgagacggcgccgcgtccgtgcggcaactgcgacacctgcctcgatccgccc
gagacctgggacgccaccgtgcccgcgcagaaggcgctctcgtgcgtgcaccgcaccgga
cagcgcttcggcgtgagctacctcgtcgacgtcctgctgggcaaggacgacgaccgcatc
cggcgcttcggccacgatgcgctgagcacgtacggcatcggcaaggagctcgacgcgaac
gcctggcgcggcgtcttccggcagctcatcgcccgcgggctgctcgccgtcgatatcgag
gggcacggcgggctgcgcctgacggagggcagccgcgcggtgctgcgcggcgaggagcgg
ctgtggctgcggcgcgaggccaagccggaacggacgcgcaaggcgaaggccgcgcgcgag
gcgcacggcgctttcacggccgaggccgacgtgcgtctctgggaggcgctgcgaacgcgc
cgcctcgagctcgcgcgcgagaagggcgttccgccctatgtcgtgtttcacgacgccacc
ctcgccgaaatggtcgagcgccggccgcgcacgctcgaggcgctctcgcacatatcgggc
gtcggcgaacgcaagctcgcggcctacggcgacgacttcctcgccgtcattcggacgcac
gcggccgagtccgagccgatcgaggcgacggcccccgcttcgtga
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