Sulfurifustis variabilis: SVA_3335
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Entry
SVA_3335 CDS
T05321
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sva
Sulfurifustis variabilis
Pathway
sva03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sva00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SVA_3335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sva03021
]
SVA_3335
03400 DNA repair and recombination proteins [BR:
sva03400
]
SVA_3335
Enzymes [BR:
sva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SVA_3335
Transcription machinery [BR:
sva03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SVA_3335
DNA repair and recombination proteins [BR:
sva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SVA_3335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
BAU49882
UniProt:
A0A1C7AF58
LinkDB
All DBs
Position
complement(3385571..3386566)
Genome browser
AA seq
331 aa
AA seq
DB search
MQSTATEFLKPRHVNVETLSPTHAKIMLEPLERGFGYTLGNALRRILLSSMPGAAITEVK
IDGVLHEYSTIEGVQEDVIEILLNLKSLALTMHGRDEAMLRLSKKGPGLVTAGDITLDHD
IEVVDPNHVIATLTKPVTLSMELKVNRGRGYQPVSARLPTEGGRAIGSMQLDASFSPIRR
VSYTVENARVEQRTDLDKLVLDIETNGSIDPEEAVRRAANILQDQISIFVDLKSPESREE
QKREPEMDPLLLRPIDDLELTVRSANCLKAENIFYIGDLIQKTEFELLKTPNLGKKSLTE
IKDVLAQHGLSLGMKLESWPPAALRAGEKAS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgcagagtaccgccactgaattcctgaagccgcgtcacgtcaacgtcgagacgctttcg
cccacgcacgccaagatcatgctcgagcctctcgagcgcggcttcggctacacgctcggc
aacgcactgcgtcgcatcctgctctcgtcgatgcccggtgcggcgatcaccgaggtcaag
atcgatggcgtcctgcacgaatactcgaccatcgagggcgtgcaggaggacgtgatcgag
atcctgctgaacctcaagtcgcttgcgctgaccatgcacgggcgcgacgaggcgatgttg
cgcctcagcaagaagggcccgggcctggtgacggcgggcgacatcacgctcgatcacgac
atcgaggtcgtggacccgaaccacgtcatcgcaacgctcacgaagccggtgacgctgagc
atggagctcaaggtcaaccgcggtcgcggctatcagccggtttcggcgcgcctgccgacc
gagggtggacgcgcaatcggctcgatgcagctcgatgcctcgttcagcccgatccgacgc
gtctcctataccgtggagaatgcccgcgtcgagcagcggaccgaccttgacaaactcgtc
ctcgacatcgagaccaacggctcgatcgatcccgaggaggcggtgcgccgcgccgcgaac
atcctccaggatcagatctcgatcttcgtcgacctcaagagcccggagagccgggaggag
cagaagcgcgagccggaaatggacccgctgctgctgcggccgatcgacgacctcgagctg
accgttcgctcggccaactgtctcaaggccgagaacatcttttacatcggcgacttgatc
caaaagaccgagttcgagctcctgaagacgccgaacctcgggaagaagtcgctcaccgag
atcaaggacgtgctggcccagcacgggctgtcgctcggcatgaagctcgaaagctggccg
ccggctgccctccgggcgggcgagaaggcgtcctga
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