Sulfurifustis variabilis: SVA_3365
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Entry
SVA_3365 CDS
T05321
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sva
Sulfurifustis variabilis
Pathway
sva03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sva00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SVA_3365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sva03021
]
SVA_3365
03400 DNA repair and recombination proteins [BR:
sva03400
]
SVA_3365
Enzymes [BR:
sva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SVA_3365
Transcription machinery [BR:
sva03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SVA_3365
DNA repair and recombination proteins [BR:
sva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SVA_3365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
BAU49912
UniProt:
A0A1C7AF76
LinkDB
All DBs
Position
complement(3403298..3407512)
Genome browser
AA seq
1404 aa
AA seq
DB search
MKDLFNLFKQPGKTEDFDSIRIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSKVRRERMGHIELASPVAHIWFLKSL
PSRMGLILDMTLRDIERVLYFEAYVVIDPGMTPLEKSQLLSEDAYLNAIEQYGDEFDARM
GAEAIRDLMRSINLEEEAKKLRGELAETNSETKIKKLTKRLKVIEAFLYSGNRPEWMVLE
ILPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPDIIVRNEKRMLQ
EAVDALLDNGRRGKAITGANKRQLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKKMALELFKPFIFHKLEAKGLATTIKAAKKMVEAAGPEVWDILEEVIREHP
VLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAPYNADFDGDQMAVHIPLSVEAQLEA
RALMMSTNNVLSPANGDPIIVPSQDIVLGLYFMTRSRVNAPGEGKAFADVAEVHRAYESR
QVSLHAKIKVRIREVQLGEDGAGTETHKLYDTTVGRALLSEILPEGLPFEMINRELKKKA
ISELINQAYRRVGLKATVIFADQLMYTGFYYATRAGISIGVDDMLTPAEKAEIIGAAESE
VRSIQNQYASGLLTDGERYNKVVDIWTHTSERIAKAMMDQLGVEQVEDAKGQAVKQDSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVCQDLVVTEDDCGTTNGVTKSALVEGGEVVIALKDRIL
GRVVIGDIRDPADDKQVIIPDGTMIDERLVALLEEKHIDQVLVRSPVTCDTRYGVCRKCY
GRDLGRGHLVNLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRATAISRIEVKTTGTVR
LKNIKLVKHASGNHVAVSRSGELIIQDDQGRNRERYKVPFGAVLSVIDGSRAKAGTVVAN
WDPHTHPIITEVAGKVAFSDLIEGVTVNKQTDEITGLSTYVVLDAKHRSGAKDIRPVITL
LDGKGKPVTIPGTEIPAKYMLPPGAIITVEDGAKVGVGDVLARIPQEVSKTRDITGGLPR
VAELFEARKPKDHAILAETSGVVSFGKDTKGKQRLIITDKEGVDHEYLIPKGRHITVFEG
ETVEQGDVIVEGAPVASDILRLLGAEALTNYIVDEVQDVYRLQGVKINDKHIEVIVRQML
RKVKVLDPGDTRFLPGEQAERARLLEENEEVSLDKKKEATFEPVLLGITKASLSTESFIS
AASFQETTRVLTEAAINGKHDLLRGLKENVIVGRLIPAGTGLAYHQERRRQRGEAREEAR
ELERSLSGRLRGPRTESGEEAVGA
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagatcttttcaacctcttcaagcagccgggcaagaccgaggacttcgattccatc
cggatcggcctcgcgtcgcccgagaagatccgctcgtggtcctacggcgaggtgaagaag
ccggagacgatcaactaccggaccttcaagccggagcgcgacggcctgttctgcgccaag
atcttcgggccggtgaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgcggcgtgatctgcgagaagtgcggcgtggaggtgacgctctccaaggtccggcgcgag
cgcatgggccacatcgagctcgcctcgccggtggcgcacatctggttcctgaagtcgctc
ccctcgcggatgggtctcatcctcgacatgacccttcgcgacatcgagcgcgtgctctat
ttcgaggcctacgtggtcatcgatccgggcatgacgcccctcgagaagagccagttgctc
tccgaggacgcgtacctcaacgccatcgagcagtacggcgacgagttcgacgcgcgcatg
ggcgcggaggccatccgcgacctcatgcggtcgatcaacctcgaggaagaggcgaagaag
cttcgtggcgagctggccgagaccaactccgagaccaagatcaagaagctcaccaagcgc
cttaaggtcatcgaggcgttcctgtactcgggcaaccggccggagtggatggtgctcgag
atcctgcccgtgctgccgccggagctgcgtcccctcgtgccgctcgacggcggccggttc
gcgacgtccgacctcaacgatctctaccggcgtgtcatcaaccgcaacaaccgtctgaag
cgcctgctcgacctgaacgccccggacatcatcgtgcgcaacgagaagcgcatgctgcag
gaggcggtggacgcgctgctcgacaacggccgccgcggcaaggcgatcacgggcgccaac
aagcgccagctcaagtcgctggccgacatgatcaagggcaagcagggccggttccgccag
aacctgctcggcaagcgtgtcgactactccggccgctcggtcatcgtggtcggcccgacg
ctcaagctccaccagtgcggcctgccgaagaagatggcgctcgagctgttcaagccgttc
atcttccacaagctcgaggccaagggcctcgccaccaccatcaaggccgccaagaagatg
gtcgaggcggccggccccgaggtctgggacatcctcgaagaggtgatccgcgagcacccg
gtgctgctcaaccgcgccccgacgctgcaccgcctcggcatccaggcgttcgagccgcag
ctcgtggagggcaaggcgatccagctgcacccgctcgtgtgcgcgccgtacaacgccgac
ttcgacggcgaccagatggcggtccacatcccgctctcggtcgaggcgcagctcgaggcg
cgcgcgctcatgatgtcgaccaacaacgtgctctcgcccgccaacggcgacccgatcatc
gtcccctcgcaggacatcgtcctcgggctgtacttcatgacgcgctcgcgcgtgaacgcc
ccgggcgaaggcaaggccttcgcggacgtggccgaggtgcaccgcgcctacgagtcgcgg
caggtctcgctgcacgcgaagatcaaggtgcgcatccgggaggtgcagttgggcgaggac
ggcgccgggaccgagacccacaagctctacgacaccacggtcggccgcgccctcctgtcg
gaaatcctgccggaagggctgccgttcgagatgatcaaccgggagctcaagaagaaggcg
atctccgagctgatcaaccaggcgtaccggcgggtggggctcaaggcaaccgtcattttc
gccgaccagttgatgtacacgggcttctactacgcgacgcgcgccggtatttcgatcggc
gtcgacgacatgctcacgcccgcggagaaggccgagatcatcggcgccgccgagagcgag
gtgcggagcatacagaaccagtatgcttcggggctgctgaccgacggcgagcgctacaac
aaggtcgtcgacatctggacccacacgagcgagcgcatcgcgaaggcgatgatggaccag
ctcggcgtggaacaggtggaggacgcgaagggtcaggcggtcaagcaggactcgttcaac
tcgatttacatgatggccgactcgggcgcgcgcggcagcgccgcccagatccgccagctc
gccggcatgcgcggcctgatggccaagcccgacggctcgatcatcgagacgccgatcacg
gcgaacttccgcgaaggcctgaacgtgctgcagtacttcatctcgacccacggcgcgcgc
aagggcctggccgacaccgcgctcaagaccgcgaactccggttacctgacccggcgcctg
gtcgacgtgtgccaggatctggtggtcaccgaggacgactgcggcaccaccaacggcgtg
accaagagcgcgctcgtggaaggcggcgaggtcgtgatcgcgctcaaggatcgcatcctc
gggcgcgtcgtgatcggcgacatccgcgacccggccgacgacaagcaggtcatcatcccc
gacgggaccatgatcgacgagcgtctggtcgcgctgctggaggagaagcacatcgaccag
gtgctggttcgctcgccggtgacctgcgacacgcgctacggcgtgtgccgcaagtgctac
gggcgcgacctcggccgcggtcacctggtgaacctcggcgaggcggtgggtgtcatcgcc
gcgcagtcgatcggcgagccgggcacgcagctcacgatgcggacgttccacatcggcggc
gccgcctcgcgcgcgaccgcgatctcgcgcatcgaggtcaagaccacgggcacggtgcgc
ctcaagaacatcaagctcgtgaagcacgcgagcggcaaccacgtggcggtgtcccgctcg
ggcgagctcatcatccaggacgaccagggccgcaaccgggagcgctacaaggtgccgttc
ggcgccgtgctctccgtgatcgacggcagccgcgccaaggccgggaccgtcgtcgcgaac
tgggatccgcatacgcacccgatcatcacggaggtggcgggcaaagtggccttcagcgac
ctcatcgaaggcgtgaccgtcaacaagcagaccgacgagatcacggggctgtcgacctac
gtcgtgctcgacgccaagcaccgttcgggcgcgaaagacatccgcccggtcatcacgctg
ctcgacggcaagggcaagccggtcacgatcccgggcacagagatcccggcgaagtacatg
ctgccgccgggcgcgatcattaccgtggaggacggcgccaaggtgggcgtgggcgacgtg
ctcgcgcgcatcccgcaggaggtgtcgaagacccgcgacatcaccggcggcctgccgcgg
gtggccgagctcttcgaggcgcgcaagcccaaggaccacgccatcctcgctgagacgagc
ggcgtcgtgtcgttcggcaaggacaccaagggcaagcagcggctcatcatcaccgacaag
gaaggcgtggatcacgagtacctgatcccgaagggccggcacatcacggtgttcgagggt
gaaaccgtggagcagggcgatgtgatcgtcgagggcgcgccggtcgcctccgatatcctc
cggctgctcggcgccgaggcgctcaccaactacatcgtggacgaggtccaggacgtgtac
cgtctccagggcgtcaagatcaacgacaagcacatcgaggtgatcgtccggcagatgctg
cgcaaggtgaaggtgctcgatccgggcgacacccggttcctgccgggcgagcaggcggag
cgggcgaggctcctcgaggagaacgaggaggtgtcgctggacaagaaaaaggaggccacc
ttcgagcccgtactgctcggcatcaccaaggcctcgttgtcgaccgagtctttcatctcg
gcagcgtcgttccaggagacgacccgcgtcctgaccgaggcggccatcaacggcaagcac
gacctgctccgggggctcaaggaaaacgtgatcgtcggccggctcatcccggccgggacg
gggctcgcttatcaccaggagcggcggcgccagcgcggcgaggccagggaagaggcgcgg
gagctcgagcggtcgctgagcggccgtctgcgcggcccccggaccgagtccggcgaagag
gcggttggcgcctga
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integrated database retrieval system
