Streptococcus vestibularis: NCTC12167_00889
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Entry
NCTC12167_00889 CDS
T07051
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
svb
Streptococcus vestibularis
Pathway
svb03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
svb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12167_00889 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svb03032
]
NCTC12167_00889 (rnhB)
Enzymes [BR:
svb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
NCTC12167_00889 (rnhB)
DNA replication proteins [BR:
svb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
NCTC12167_00889 (rnhB)
Elongation factors (archaeal)
NCTC12167_00889 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Apo-VLDL-II
DUF1889
Motif
Other DBs
NCBI-ProteinID:
VED87850
LinkDB
All DBs
Position
1:874555..875325
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AA seq
256 aa
AA seq
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MATIKEVKEQLATLTDLDDYRWASFEDDSRAGVQTAIKQRRKAILAEIAEEERLEMMLSY
EKVLYAQGVELIAGVDEVGRGPLAGPVVAAAVILPKFCKIKGLNDSKKIPKSKHEAIYKQ
VMKEAVAVGVGIKDNHVIDDVNIYEATKLAMAEAIEKLSPKPEHLLIDAMTLDLPIGQTS
IIKGDANSLSIAAASIVAKVTRDKMMADYDQEFPGYAFAKNAGYGTKDHLSGLDNFGVTP
IHRRSFEPIKSIIKSR
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaattaaagaagtcaaggagcaattggccactttgacagatcttgacgattac
cgatgggcaagttttgaggatgatagtcgagctggtgtgcagactgccattaagcaacga
cgtaaagctatcctagctgagattgctgaggaagaacgcttagagatgatgctcagttac
gaaaaagtactttatgctcagggagttgaactcattgcaggtgttgatgaagttggacgt
ggccctttggctgggccggtggtagctgcagcggttatcttaccaaagttttgcaaaata
aaaggtctcaatgacagtaaaaaaattcccaaatcaaaacatgaagccatttataagcag
gtgatgaaggaagcagttgctgttggggttggtattaaggacaaccatgtgattgacgat
gtcaatatttatgaagcaaccaagcttgctatggctgaagctattgaaaaacttagtccc
aaacctgaacatttgttaattgatgccatgactttggacctaccaataggacaaacatca
attataaaaggggatgctaattctttatctattgcggcagcttccatcgtagcgaaggta
acccgtgataagatgatggctgactatgatcaggagtttcctggttacgcatttgccaaa
aatgcaggctatggtaccaaggatcatctgtctggcctagataactttggtgttacacca
attcatagaagaagcttcgaaccaataaagtcaataataaaaagtaggtga
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