Streptococcus vestibularis: NCTC12167_00957
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Entry
NCTC12167_00957 CDS
T07051
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
svb
Streptococcus vestibularis
Pathway
svb03420
Nucleotide excision repair
svb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
svb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC12167_00957 (pcrA)
03430 Mismatch repair
NCTC12167_00957 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svb03400
]
NCTC12167_00957 (pcrA)
Enzymes [BR:
svb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC12167_00957 (pcrA)
DNA repair and recombination proteins [BR:
svb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC12167_00957 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NCTC12167_00957 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
Terminase_6N
ResIII
Motif
Other DBs
NCBI-ProteinID:
VED87985
LinkDB
All DBs
Position
1:939898..942207
Genome browser
AA seq
769 aa
AA seq
DB search
MNPLLTGMNDKQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMINPWNILAITF
TNKAAREMRERAMALNPATSETLIATFHSMCVRILRREADHIGYNRNFTIVDPGEQRTLM
KRILKTLNLDPKKWNERAILGTISNAKNDLLDEVAYEHQAGDMYTQIVAKCYKSYQEELR
RSEAMDFDDLIMMTLRLFDKNPDVLAYYQQRYQYIHVDEYQDTNHAQYQLVKLLASRFKN
ICVVGDADQSIYGWRGADMQNILDFEKDYPEAKVVLLEENYRSTKKILQAANEVIKNNRN
RRPKKLWTQNDDGEQIVYYRANDERDEAVFVASTIDNIVREEGKNFKDFAVLYRTNAQSR
TIEEALLKSNIPYTMVGGTKFYSRKEIRDVISYLNLIANPSDNISFERVVNEPKRGVGPG
TLEKIRNFAYEQNMSLLDASANIMLSPIKGKAAQGVYDFANTILNLRDQLDGLSITETVE
AILDKSGYLDALSMQQTLESQARIENIEEFMSVTKNFDETNTDGTEDETGIDRLGRFLND
LALIADTDDGDMEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPEELEEERR
LAYVGITRAEEILFLTNANTRTLFGKTSYNRPSRFLREISDDLLQYQGLARPANSSFGVR
FTKEEPTQFGQGMSLQQALQTRKANAQPQRHTGAQPFSKATGGLPFGKASDSGNSATDWE
IGDIAHHKKWGDGTVLEVTGSGKTQELKIKFPEVGLKKVLSSVAPIVKK
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgaacccattattaactggtatgaatgacaaacaggccgaagcagttcaaacgactgaa
ggccctcttttgattatggctggtgcaggatctgggaagacacgtgtgcttacccaccgc
attgcctaccttatcgacgagaaaatgatcaatccctggaatatcctagccatcaccttt
accaataaggctgcccgtgagatgcgtgagcgtgctatggctttaaatccagcaacttca
gaaaccttgattgcgaccttccatagcatgtgtgtgcgaatccttcgtcgtgaagcggac
catattggatacaaccgaaactttactatcgtggatcctggggaacaacgtactttgatg
aaacgtattctaaagactcttaatcttgatcctaagaagtggaatgaacgtgccatctta
gggacgatttccaacgccaaaaatgatttattggatgaagtggcctatgagcaccaggct
ggtgatatgtacacccaaatcgttgctaaatgttataagtcctatcaggaagagctccgt
cgtagcgaagccatggatttcgacgatttgattatgatgactttacgtctctttgacaaa
aatcctgatgttctcgcctattatcagcagcgttatcagtacattcacgtggatgagtac
caagataccaaccatgctcagtatcagttggtaaaactcttagcatctcgcttcaagaat
atctgtgtcgtaggtgatgcggaccaatcaatctacggttggcgtggggctgatatgcag
aacatccttgattttgagaaggactatcctgaagctaaggttgtcctcttggaggaaaac
taccgttcaaccaagaagattctccaggcggccaacgaagttatcaagaataaccgcaac
cgccgtcctaagaaactttggactcaaaatgacgacggtgaacaaatcgtttattaccgt
gctaatgacgagcgtgatgaggctgtattcgtagcttcaacaatcgacaatatcgtccgt
gaagaaggcaagaatttcaaagactttgctgttctttaccgtaccaatgctcagtctcgt
actattgaggaagccttgctcaagtctaatattccttatacaatggttggtgggacaaaa
ttctacagccgtaaagagattcgtgatgttatttcttatttgaacttgattgccaaccct
tcagataacatcagttttgaacgtgtcgtcaatgaacctaaacgtggagttgggcctggc
acgctcgaaaagattcgtaactttgcctatgagcaaaatatgagccttctagatgcttca
gcgaatattatgttgtctcctattaagggaaaagcagctcaaggcgtttacgatttcgct
aacacgattctgaacctacgtgaccagctagatgggctaagcattaccgagactgtagaa
gctattttagacaagtctggttatctggatgctctgtccatgcaacaaacgcttgaaagc
caagcacgcattgaaaatatcgaagaattcatgtctgttactaagaattttgatgaaacc
aacaccgatggtacggaggacgagacaggtattgaccgtttaggtcgtttcttgaatgat
ctagctttgattgctgatacggatgatggtgatatggaagcggcagaagtaaccttgatg
actcttcatgctgctaaaggacttgaattcccagtcgtctttcttatcggtatggaagag
ggagtcttccctttgtctcgtgcttcagaggatccagaagaactcgaagaagagcgtcgc
ttagcttacgtaggtattacccgtgctgaagagatccttttccttaccaacgctaataca
cgtacgctttttggtaagactagctataatcgccctagccgtttcttgcgtgaaatttca
gatgatttattacaatatcaaggtctagcacgtccagccaattcatcatttggtgttcgt
tttacaaaggaagagccaacacaatttggtcagggcatgagtttacaacaagcgcttcag
accagaaaagcaaatgcacaaccgcaaaggcatactggcgctcagccattttcaaaagct
actggcggactaccttttggtaaggcttcagactctggaaattcagctactgattgggaa
atcggagatattgctcaccacaagaagtggggagatggtaccgttctagaagtaactgga
agtggcaagacacaggaacttaagataaaattcccagaagttggacttaaaaaagtcttg
tcaagcgtagcacctattgtgaagaaatag
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integrated database retrieval system
