Streptococcus vestibularis: NCTC12167_01132
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Entry
NCTC12167_01132 CDS
T07051
Symbol
hupB
Name
(GenBank) DNA-binding protein HU 1
KO
K03530
DNA-binding protein HU-beta
Organism
svb
Streptococcus vestibularis
Brite
KEGG Orthology (KO) [BR:
svb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svb03032
]
NCTC12167_01132 (hupB)
03036 Chromosome and associated proteins [BR:
svb03036
]
NCTC12167_01132 (hupB)
03400 DNA repair and recombination proteins [BR:
svb03400
]
NCTC12167_01132 (hupB)
DNA replication proteins [BR:
svb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC12167_01132 (hupB)
Chromosome and associated proteins [BR:
svb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NCTC12167_01132 (hupB)
DNA repair and recombination proteins [BR:
svb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NCTC12167_01132 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
DUF2267
Rpf1_C
PaaA_PaaC
Motif
Other DBs
NCBI-ProteinID:
VED88317
LinkDB
All DBs
Position
1:complement(1112443..1112718)
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AA seq
91 aa
AA seq
DB search
MANKQDLIAKVAEATELTKKDSAAAVDAVFASIEEFLAAGEKVQLIGFGNFEVRERAARQ
GRNPQTGETISIAASKVPAFKAGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaaacaagatttgatcgctaaagttgcagaagcaactgagcttactaaaaaa
gattcagcagcagctgtagatgcggttttcgcttctatcgaagaattccttgctgcaggt
gaaaaagtacaattgattggtttcggtaactttgaagtgcgtgaacgtgctgctcgtcaa
ggtcgtaacccacaaactggtgaaactatctcaatcgcagcttctaaagttcctgcattt
aaagctggtaaagctcttaaagacgcagttaaataa
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