Streptococcus vestibularis: NCTC12167_01341
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Entry
NCTC12167_01341 CDS
T07051
Symbol
sbcC
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
svb
Streptococcus vestibularis
Brite
KEGG Orthology (KO) [BR:
svb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svb03400
]
NCTC12167_01341 (sbcC)
DNA repair and recombination proteins [BR:
svb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC12167_01341 (sbcC)
Archaeal homologous recombinant proteins
NCTC12167_01341 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_23
SMC_N
Snapin_Pallidin
TolA_bind_tri
ABC_tran
AAA_21
Motif
Other DBs
NCBI-ProteinID:
VED88747
LinkDB
All DBs
Position
1:complement(1347387..1350566)
Genome browser
AA seq
1059 aa
AA seq
DB search
MRPVQLELTNFGPYRKEVINFTQFDHAPLFLIGGDTGAGKSTLFDAMTVALFATTSGDRN
VEEMRSTFAGPGDDLTKVTFYFQQGKHLYRIERMLQQERAKRGGGTTMQKATASLVIVDK
IGGQEIEKLGDKIKEVSDQIEQILGLNAEQFKQIILLPQNDFSRFLKEDSKTKTQILKKI
FGTGIFDHFQKSLEERFRQSNKDMEKRQAQLDGHFASQVWSEEELAVLAQTPASEKLARL
EELLIQRQENVTKQKIILKDAHEDLAQLQKSLQTAQDLAKIFQEVEQAKERYRLEIEEGA
QGQAEAKVHLEELQFAQGLQETISSLKQYQKQLIQLEQDLDIAQEVLSEKRQAFEDVEAQ
KEELAVQSEDFLKKEEKLGAWKEDIIYAQSLAQEQKKIKGSTTNYKQLEATYQQASKEIE
TLNQSLSDLEANRLSLESLHEAEKLLQSVGYSVENQLAQDLNEIEGMNEELTKTEKRRQT
LSFDIDQAQESLKELEEKLRTTLASRRQLMIAQLQAELEEGQPCMVCGALEHPNVGGAQA
DEVALKNLMDQVEKLQVQKEKQVATVSNRQATLSEVESKRQDLLDQVTKVKVTLEKHYQE
LEEQVKGRFEFDFSEHYEADRGQALLLKVKKYYQKLQKRFDKEEDDCVRYQDEIGKAQEK
LTKSAKTYQEAKAVLEQSKERLRDLQEAHPELESVEVYQNRIAHAKQELALYEKQVKENG
EVYNQLHADIREIKGQLESITKSKEKLEQDVKRLSAELEQSIKAEGALTNDLEQVELWLL
EVNNQAIPMLQAKLTTYATLKQELQAQICKGQELLQNKEQPDLDSLAQEVQACQENYDKQ
LAQVSVMKKGLKDATATYQAAKTLQDSNLDAFKVHQELSDLVKVVKGENTALTGRLNLEV
YVIRQYFQQILDYANANYIGLLTDNRYSFVLSEEGRRARDHFGLDINVYDQLTGSERSVK
SLSGGETFIAALAIALSLSEVVQNTSKGAVIEALFIDEGFGSLDKEALTKAIAVLEQIGE
NRMVGVISHVDDMKEGIAQQLAIIKSHDGSSRIKIVDKG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgagaccagtccagttagaattgaccaattttggaccttatcgtaaggaagtcatcaat
ttcacccagtttgaccatgctcccctctttttgattggaggggacacaggggctggtaag
agtacactctttgatgccatgacggttgccttgtttgccacaaccagtggcgaccgcaat
gttgaggagatgaggtcaaccttcgctggtccaggggatgacttgaccaaggtaaccttt
tattttcaacaaggcaagcatctttatcgcattgagcgaatgctccagcaggagagagcc
aagcgaggtgggggcactaccatgcaaaaggcgacggcttctctagtcattgtggataag
attggtggtcaggaaattgaaaagcttggggataagatcaaggaagtgagtgatcagatt
gagcagattttgggtctcaatgccgagcagttcaagcagattatcctccttccacaaaat
gatttcagccgtttcttgaaagaagattctaagaccaagactcaaattttaaagaaaatc
tttggaacgggtatttttgaccattttcaaaagagcttggaagagcgttttcgtcagagt
aataaggatatggaaaagcgtcaggctcagctagatggtcattttgccagtcaggtttgg
tctgaggaagaattagccgtcttggcccaaacgccagcctctgaaaaactggcacgtctt
gaagagcttttgattcagcgtcaagaaaatgttacgaagcaaaaaatcatcttgaaggat
gcccatgaggatttggcacaactgcagaagagcttgcaaactgcccaagatttggcaaag
attttccaagaagtggagcaagccaaggagcgttaccgtctggaaattgaggagggagct
cagggacaggcagaggcaaaagtgcatctggaggaattacagtttgctcaaggattacaa
gaaaccattagtagcttgaagcaatatcagaaacagttgatacaattagagcaggatctt
gatattgctcaagaagtattaagtgaaaagcgtcaggcgtttgaggacgttgaggctcaa
aaagaggaactcgcagttcaatctgaggattttcttaaaaaagaagagaaactgggagcg
tggaaagaggatattatctatgctcagagtcttgcccaagagcagaagaaaattaaaggt
tcaactactaactacaagcagttggaagcaacctatcagcaggcttcaaaagagatcgag
actcttaaccagtctctgtcagatttggaagctaatcgtcttagtttagagagtttgcat
gaggccgaaaaactccttcagtctgtgggttacagcgtggagaatcaactggctcaagac
ctaaatgaaatagagggtatgaatgaggagttgacaaagaccgaaaaacgtcgtcaaacg
ctatcttttgatattgaccaagctcaagaaagcctcaaagaattggaggagaagctaaga
acgactttggcttcacgccgtcaactcatgattgcccaactgcaagcagagttagaagaa
ggacagccttgtatggtttgtggtgccctggaacaccctaatgttggtggagcacaagct
gatgaagtggctttgaaaaatctcatggatcaggtggagaagcttcaagttcaaaaggaa
aagcaagtcgctactgtgtcaaatcgtcaggctaccttgagcgaagttgaatctaaacgt
caagatttgcttgatcaagtgactaaagtcaaggtaactcttgaaaagcactatcaagaa
ttagaagagcaagttaagggacggtttgagtttgatttttcagagcactatgaagctgac
cgtgggcaagccctactcctgaaggttaagaagtattatcaaaagttacaaaaacgcttt
gataaggaagaggacgattgtgtccgatatcaggatgagataggtaaagctcaggaaaaa
ttgacaaaatcggctaaaacctatcaagaggctaaggcagtgctggaacaatctaaggaa
cgcctaagggatttacaagaagctcatccggagcttgagtctgttgaggtttatcaaaat
cgtattgcacatgctaagcaggaattggctctttatgagaagcaggtcaaggagaatggt
gaggtctataaccaacttcatgccgatattagagaaatcaaagggcagcttgagagtata
actaagtctaaagagaagttagaacaagacgttaagcggttatctgctgaattagagcaa
agtatcaaggctgaaggggccctcaccaatgacttagagcaggtcgaactctggcttctt
gaagtaaataatcaagctattcctatgcttcaagccaaattaacgacttatgcaactctc
aaacaagagttacaggcgcagatttgtaagggacaagagcttctccaaaataaagaacaa
cccgatctagatagtctagcgcaagaagtacaggcttgtcaggaaaactatgacaagcag
ctcgctcaggtttctgtcatgaagaagggccttaaggatgcaacggctacttaccaagcg
gctaaaacccttcaagatagcaacctagatgccttcaaggtccaccaagagctcagtgat
ttggtcaaggtggttaagggagaaaatacggctctgactggtcgtcttaatctggaagtc
tatgttatccgtcagtatttccaacaaatcttggattatgccaatgccaactacatcggt
ctcttaacggataatcgctattcctttgtcttgagcgaggaaggacgtagggcgcgtgat
cactttggtttagatatcaacgtctatgatcagttgacaggtagcgagcgttccgtcaaa
tccttgtcaggtggtgaaacctttatcgccgcactggctattgccctatctctctcagaa
gtggtgcaaaataccagcaagggggctgttattgaagctctcttcatcgatgaaggattt
ggatcactggataaggaagccttgaccaaggccatcgctgttctggaacaaatcggtgaa
aaccgcatggtcggtgtcatcagtcacgtggacgacatgaaagaaggcatcgcccaacaa
ctagccatcatcaagtcgcatgatggcagtagccgtattaagattgtggataaagggtga
DBGET
integrated database retrieval system
