Streptococcus vestibularis: NCTC12167_01542
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Entry
NCTC12167_01542 CDS
T07051
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
svb
Streptococcus vestibularis
Pathway
svb03030
DNA replication
svb03430
Mismatch repair
svb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC12167_01542 (dnaQ)
03430 Mismatch repair
NCTC12167_01542 (dnaQ)
03440 Homologous recombination
NCTC12167_01542 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svb03032
]
NCTC12167_01542 (dnaQ)
03400 DNA repair and recombination proteins [BR:
svb03400
]
NCTC12167_01542 (dnaQ)
Enzymes [BR:
svb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC12167_01542 (dnaQ)
DNA replication proteins [BR:
svb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC12167_01542 (dnaQ)
DNA repair and recombination proteins [BR:
svb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC12167_01542 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
VED89166
LinkDB
All DBs
Position
1:complement(1562271..1562861)
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AA seq
196 aa
AA seq
DB search
MENLETYIAFDLEFNTVDGVSHIIQVSAIKLNQHEEVDQFDSFVYSDVPLQSFINGLTGI
TADKIAKAPKLESVLAEFKSFVGDTPLIGYNALKSDLPILAENGLDLEEQYALDVFDEAF
DRRASDLNGIVNLKLTSVADFFGIKGHGHNSLEDARMTAQIYEKFLELDENAKLLEQQEE
VSNNPFAALGLGGLFD
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttagaaacttatattgcctttgatttggagtttaacacggtggatggggtt
agtcatattatccaagtatcggctattaagctgaatcagcatgaggaagtggaccagttt
gattctttcgtctattcggatgttcctttgcaatcctttatcaatggtttgactggaatt
acagcggataagattgccaaggcaccaaagctagagtctgttctggcggagtttaaatca
tttgttggtgacactccacttattggctacaatgctcttaaatcagatttgcctattcta
gctgaaaatggtttagacttggaagaacaatatgctttagatgttttcgatgaggccttt
gaccgtcgtgcttctgatttgaacggtattgttaacctcaagttgactagtgtggcagat
ttctttggaatcaagggacacggtcataacagcttggaggatgctcgtatgaccgcacag
atttacgagaagtttctcgaattagatgagaatgccaaacttttggagcaacaggaagaa
gtcagtaacaatccttttgctgccttaggtttgggtggccttttcgactag
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