Streptococcus vestibularis: NCTC12167_01676
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Entry
NCTC12167_01676 CDS
T07051
Symbol
comEB
Name
(GenBank) late competence protein required for DNA binding and uptake
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
svb
Streptococcus vestibularis
Pathway
svb00240
Pyrimidine metabolism
svb01100
Metabolic pathways
svb01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
svb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NCTC12167_01676 (comEB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
svb02044
]
NCTC12167_01676 (comEB)
Enzymes [BR:
svb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
NCTC12167_01676 (comEB)
Secretion system [BR:
svb02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
NCTC12167_01676 (comEB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
DUF7184
Bd3614-deam
SNAD4
APOBEC2
NAD1
APOBEC_N
APOBEC4_like
HUTI_composite_bact
OTT_1508_deam
AID
APOBEC3
Motif
Other DBs
NCBI-ProteinID:
VED89419
LinkDB
All DBs
Position
1:complement(1695829..1696284)
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AA seq
151 aa
AA seq
DB search
MPNRLSWQDYFMANAELISKRSTCDRAFVGAVLVKDNRIIATGYNGGVSETDNCNEVGHY
MEDGHCIRTVHAEMNALIQCAKEGISTKNTEIYVTHFPCINCTKALLQAGVVKITYKANY
RPHAFAIELMEQKGVSYVQHDVPEVHLGMDD
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaccgtctatcttggcaagactattttatggctaatgcagagctgatttctaaa
cgttctacctgtgaccgtgcctttgttggtgctgttttggtcaaggacaaccgcattatt
gctacaggttataacggtggagtctctgagacagataactgtaatgaggttggtcactac
atggaagatggtcactgtattcgtacggtccatgcggagatgaacgctcttatccagtgt
gccaaagaggggatttctactaaaaatacagaaatttatgtgacgcattttccctgtatt
aactgcaccaaagctctccttcaggctggcgttgttaagattacttataaggctaattat
cgcccccacgcctttgcgattgagttgatggaacaaaagggagtctcttatgtgcaacat
gatgttccagaggtacacttggggatggatgactag
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