Stella vacuolata: STVA_01950
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Entry
STVA_01950 CDS
T06335
Symbol
hup
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
svc
Stella vacuolata
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svc03032
]
STVA_01950 (hup)
03036 Chromosome and associated proteins [BR:
svc03036
]
STVA_01950 (hup)
03400 DNA repair and recombination proteins [BR:
svc03400
]
STVA_01950 (hup)
DNA replication proteins [BR:
svc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
STVA_01950 (hup)
Chromosome and associated proteins [BR:
svc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
STVA_01950 (hup)
DNA repair and recombination proteins [BR:
svc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
STVA_01950 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Phage_cement_2
HU-CCDC81_euk_2
MMS19_C
Arteri_nsp7a
PTS-HPr
Motif
Other DBs
NCBI-ProteinID:
BBK40175
LinkDB
All DBs
Position
189981..190277
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AA seq
98 aa
AA seq
DB search
MAAAETTPTVSLRQLAATLAEKHEMPKKQASAVLEDLVGLVTTHLKQGDKVRITGLGILQ
VRKRPARQGRNPATGEPIEIKASSKVAFRASKDLKDAV
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctgagaccactccgacggtgtcgctgcgccagttggcggcgaccctcgcc
gagaagcacgagatgccgaagaagcaggcgagcgccgtgctcgaggatctcgtgggcttg
gtgacgacgcatctgaagcagggcgacaaggtccggatcaccgggctcggcatccttcag
gtccgcaagcgtccggcacgccagggtcgcaatcccgccaccggtgaaccgatcgagatc
aaggcgtcttccaaggtcgctttccgcgcctccaaggatctgaaggacgcggtctga
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