Stella vacuolata: STVA_02260
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Entry
STVA_02260 CDS
T06335
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
svc
Stella vacuolata
Pathway
svc00300
Lysine biosynthesis
svc00470
D-Amino acid metabolism
svc01100
Metabolic pathways
svc01110
Biosynthesis of secondary metabolites
svc01120
Microbial metabolism in diverse environments
svc01230
Biosynthesis of amino acids
Module
svc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
STVA_02260 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
STVA_02260 (lysA)
Enzymes [BR:
svc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
STVA_02260 (lysA)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6003
DUF4262
Motif
Other DBs
NCBI-ProteinID:
BBK40206
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All DBs
Position
complement(219014..220324)
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AA seq
436 aa
AA seq
DB search
MNELSPLPAAALFDAFTYKDGVLHAEGVDLTRIADAAGTPCWVYSHGALESRYRAFDAAF
AGIPHLVCYALKANSNQAVIRTFADLGAGADIVSEGELRRALAAGVPPERIVFAGVGKTA
IEMAVALDAGILQFNVESEQELERLSAVATGLGRTASVALRVNPDVDAGTHAKITTGTAE
NKFGIEIDQARAVARRTAELPGLRLSGIAMHIGSQLTSVEPYRAAFGRLVGFARMLMSED
GHKLERLDFGGGLGVHYQHAPPVDLAAYAAAAREALAGFPGTVVLEPGRWMVADAGILLA
RVQYVKRGSLKTFVILDAAMNDLIRPALYDAWHPVRPVAEPKPGAVPETVDVVGPICESS
DVIAVGRAMPPVAQGELVAIGVAGAYGAVMGSTYNSRPLAPEVMVKDGAFSVVRARPSYE
ELIASDRLAPWQIHRP
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgagctctcgcccctgccggccgccgccctgttcgacgccttcacctacaaggac
ggcgtgctgcatgccgagggcgtggacctgacgcggatcgccgacgccgccggcacgccc
tgctgggtctattcccacggcgcgctcgaatcccgctatcgcgccttcgacgcggccttc
gccggcatcccgcacctcgtctgctatgcgctgaaggcgaacagcaaccaggcggtgatc
cgcaccttcgccgacctcggcgccggcgccgacatcgtctcggagggcgagctgcgccgg
gcgctcgcggccggcgtgccgccggaacggatcgtcttcgccggcgtcggcaagaccgcg
atcgagatggccgtcgcgctcgacgccggcatcctgcagttcaacgtcgaatccgagcag
gagctggagcggctgtcggcggtggcgaccggcctggggcggaccgccagcgtggcgctg
cgcgtcaaccccgacgtcgatgccggaacccacgccaagatcaccaccggcacggccgag
aacaagttcggcatcgagatcgaccaggcccgtgccgtcgcccggcgcaccgccgagctg
cccggcctccggctgtccggcatcgccatgcatatcggcagccagctgacctcggtcgaa
ccctaccgcgccgccttcggccgactggtcggcttcgcccgcatgctgatgagcgaggac
ggccacaagctggagcggctggatttcggcggcgggctcggcgtgcactaccagcacgcg
ccgccggtcgacctcgccgcctatgccgcggccgcgcgcgaggcgctggcgggcttcccc
gggaccgtcgtcctggagcccggccgctggatggtggccgacgccggcatcctccttgca
cgggtgcaatatgtgaagcgcggctcgctcaagaccttcgtcatcctggatgcggcgatg
aacgacctgatccggccggccctctacgacgcctggcacccggtccgtcccgtcgccgag
ccgaagcccggcgccgtgccggaaacggtcgacgtcgtgggcccgatctgcgagtcgagc
gacgtgatcgccgtcggccgggccatgccgccggtcgcccagggcgagctggtggcgatc
ggcgtcgccggcgcctatggtgccgtcatgggatccacctacaacagccggccgctggcg
ccggaggtgatggtgaaggacggggccttttccgtggtgcgtgcccgccctagttatgaa
gaactgatcgcatcggacaggctggccccgtggcagatccaccgaccgtaa
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