Stella vacuolata: STVA_03320
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Entry
STVA_03320 CDS
T06335
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
svc
Stella vacuolata
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svc03016
]
STVA_03320 (truB)
Enzymes [BR:
svc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
STVA_03320 (truB)
Transfer RNA biogenesis [BR:
svc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
STVA_03320 (truB)
Prokaryotic type
STVA_03320 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Tailspike_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BBK40312
LinkDB
All DBs
Position
328100..329062
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AA seq
320 aa
AA seq
DB search
MRRAERAAIHGWLVVDKPLGLTSTAAVGRIRRLTGAAKVGHGGTLDPLATGLLPIALGEA
TKTVGFAMTGAKTYRMRVAWGEERSTDDREGIVTATSAVRPDAGAIAAALPAFIGQILQV
PPAFSAIKVAGQRSYALARAHAAGTGEAPPELAARPARIDAIRPIDPGASPDEAEFEVDC
GKGVYMRSLARDLARALGTCGHVAALRRTRVGPFDLSHAISLDTEIPLDNGGDLCDKAAI
IAHLLPVATALDDIPALALTEAEAERLRHGGAVSPGSADQVRRLAALGDGTVVSAFEGDR
LVALAEVRGGAIRPVRVMNL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgctgaacgggcggcgatccacggctggctggtcgtcgacaagccgctgggg
ctcacctccaccgccgccgtcggccgcatccgccggctgaccggtgcggccaaggtcggc
catggcggcacgctcgacccgctcgccaccgggctcctgccgatcgcgctcggcgaggcg
accaagacggtcggcttcgccatgaccggggccaagacctatcgcatgcgggtggcgtgg
ggcgaggagcggtcgaccgacgaccgcgagggcatcgtgaccgcgaccagcgccgtgcgc
ccggacgcgggcgccattgcggccgccctgccggccttcatcggccagatcctccaggtc
ccgcccgccttctccgccatcaaggtggccggccagcgctcctatgccctggcccgggcc
catgcggccggcaccggcgaggcgccgcccgaactggcggcccgcccggcgcggatcgat
gcgatccggccgatcgaccccggcgcctcgcccgacgaggcggaattcgaggtcgattgc
ggcaagggcgtctacatgcgcagcctcgcccgcgacctggcccgcgcgctcggcacctgc
gggcatgtcgcggccctgcggcggacccgtgtcggccctttcgacctgtcccatgcgatt
tcgctggacacggagattcctctagataacgggggggatctctgcgataaggccgcgatt
atcgcgcacctgcttcctgtcgcgaccgcgctggacgacatcccggccctggccctgacg
gaagcggaggcggagcgcctgcgacacggcggtgccgtgtcgccaggttcggcggatcag
gtccgccggcttgcagcgctcggcgacggcacggtcgtatccgccttcgagggcgatcgg
ctggtggccctggccgaggtgcggggcggcgccatccggccggtgcgcgtgatgaacctc
tag
DBGET
integrated database retrieval system
