Stella vacuolata: STVA_03340
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Entry
STVA_03340 CDS
T06335
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
svc
Stella vacuolata
Pathway
svc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STVA_03340 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svc03019
]
STVA_03340 (pnp)
03016 Transfer RNA biogenesis [BR:
svc03016
]
STVA_03340 (pnp)
Enzymes [BR:
svc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
STVA_03340 (pnp)
Messenger RNA biogenesis [BR:
svc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
STVA_03340 (pnp)
Transfer RNA biogenesis [BR:
svc03016
]
Prokaryotic type
tRNA degradation factors
STVA_03340 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
BBK40314
LinkDB
All DBs
Position
329603..331723
Genome browser
AA seq
706 aa
AA seq
DB search
MFDIQRVELTWGGRKLVLETGKIARQADGAVMATYGETTVLCTVVGAKSVRPGIDFFPLT
VNYQEKTFAAGKIPGGFFKREGRPTEKETLVSRLIDRPIRPLFVKGFLNEVQVVCTVLSH
DLENDPDIVALVGASAALTLSGLPFLGPVGAARVGYIDGEYVLNPLSDALASSKLDLVVA
GTAEGVLMVESEAQELSEEVMLGAVTFGHQAFQPVIDAIIQLAERAAKDPWPLPEKSTAA
LPVKEKLAAFGGDFRDAYMEPLKQLRHEKVSAAKAKALATLDEGEREIGQGLFKSMEADV
VRGAILDTGVRIDGRDVRTVRPIVSEVGVLKRAHGSALFTRGETQALVVTTLGTGQDEQV
IDALAGEYREHFMLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAVRPLLPKKDTFPYT
IRIVSEITESNGSSSMATVCGASLSMMDAGVPLVRPVAGIAMGLIKEGERFAVLSDILGD
EDHLGDMDFKVAGTETGVTALQMDIKITSITEEIMKVALGQARDGRLHILGEMQKALTSA
REGVSGNAPRITTISIPKEKIREVIGSGGKVIREICEVTGAKIDIEDDGTIKVAAVDADA
AQKAIDWIRGIVAEPEMGVIYNGKVVKTVDFGAFVNFLGSRDGLVHISELAASRVGKVTD
VVNVGDPVKVKVLGIDERGKVRLSMKVVDQATGADLQEAGKAEAGQ
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacattcagcgcgtggaattgacgtggggcgggcgcaagctcgttctcgagacg
gggaagattgcccgacaggccgatggcgccgtgatggcgacctatggcgagacgacggtg
ctgtgcacggtcgtcggcgcgaagtcggtgcgccccggcatcgatttcttcccgctcacc
gtcaattatcaggagaagacgttcgcggcgggcaagatcccgggcggcttcttcaagcgc
gaaggccggccgaccgagaaggagacgctggtctcccgcctcatcgaccgtccgatccgg
ccgctcttcgtgaaagggttcctcaacgaggtgcaggtcgtctgcaccgtgctgtcccat
gacctggagaacgatcccgacatcgtcgccctggtcggtgcctcggccgccctcaccctg
tccggcctgccgttcctgggcccggtcggcgcggcgcgggtcggctacatcgacggcgag
tacgtcctcaacccgctgtcggacgcgctcgcctcctccaagctcgacctcgtcgtcgcc
ggcaccgccgagggcgtgctgatggtcgagtccgaggcgcaggagctgtcggaagaggtc
atgctgggcgcggtcaccttcggccatcaggcgttccagccggtgatcgacgcgatcatc
cagctggcggagcgggccgccaaggatccgtggccgctgccggagaagtcgaccgccgcc
ctgccggtcaaggagaagctcgcggccttcggcggcgacttccgcgacgcctacatggag
ccgctgaagcagctgcgccacgagaaggtctcggccgccaaggccaaggcgctggcgacc
ctcgacgagggcgagcgcgagatcggccagggcctgttcaagtcgatggaggcggacgtg
gtgcgcggcgccatcctcgacaccggcgtgcgcatcgacggccgcgacgtgcgcaccgtg
cgcccgatcgtgtccgaggtcggcgtgctgaagcgtgcccatggcagcgcgctcttcacc
cgcggcgagacccaggcgctggtggtgaccacgctcggcaccggccaggacgagcaggtc
atcgacgcgctggcgggcgaataccgcgagcacttcatgctgcactacaacttcccgccc
tactcggtgggcgaggccggccgcatgggcagccccggccgccgcgagatcggccatggc
aagctcgcctggcgcgcggtgcggcccctgctgccgaagaaggacaccttcccctacacg
atccgcatcgtgtcggagatcacggaatccaacggctcctcgtcgatggccaccgtctgc
ggcgcatccctgtcgatgatggatgcgggcgtgccgctggtccgcccggtcgccggcatc
gccatgggcctgatcaaggaaggcgagcgcttcgcggtcctgtccgacatcctcggcgac
gaggaccatctgggcgacatggacttcaaggtcgccggcaccgagaccggcgtcaccgcg
ctgcagatggacatcaagatcacctcgatcaccgaggagatcatgaaggtggcgctgggc
caggcccgcgacggccgcctgcacatcctgggcgagatgcagaaggcgctgacctcggcg
cgcgaaggggtgagcggcaacgcgcccaggatcaccaccatcagcatcccgaaggagaag
atccgcgaagtgatcggctccggcggcaaggtcatccgcgagatctgcgaagtgaccggc
gccaagatcgacatcgaggacgacggcaccatcaaggtggcggcggtcgatgccgatgcc
gcccagaaggcgatcgactggattcgcggcatcgtcgcggagccggagatgggtgtcatc
tacaacggcaaggtggtgaagaccgtcgatttcggcgccttcgtcaacttcctcggcagc
cgcgacgggctggtccacatcagcgagctggcggcgagccgggtcggcaaggtgacggac
gtggtcaatgtcggcgatccggtgaaggtgaaggtgctgggcatcgacgagcggggcaag
gtccgcctgtcgatgaaggtcgtcgaccaggcgaccggcgccgacctgcaggaagccggc
aaggccgaggccggccaatag
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