Stella vacuolata: STVA_05360
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Entry
STVA_05360 CDS
T06335
Name
(GenBank) poly(A) polymerase/tRNA-nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
svc
Stella vacuolata
Pathway
svc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STVA_05360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svc03019
]
STVA_05360
Enzymes [BR:
svc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
STVA_05360
Messenger RNA biogenesis [BR:
svc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
STVA_05360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
BBK40516
LinkDB
All DBs
Position
549275..550498
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AA seq
407 aa
AA seq
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MEARGCLLPQPWMTASATRRVMAAVAGGGGRARFVGGMVRDALLGRPISDIDLATDLDPE
RVMGRLVADGIRVIPTGLAHGTVTAVVGGRHFEITTLRRDVETDGRHARIAYTDDWAEDA
RRRDFTINALFADGDGTFYDPAGGLDDLVLRRVRFVGDPDQRIHEDVLRLLRYYRMLARL
GIHGLDAPSRAACRRHAGRLPALSGERVRGEVERILSVADPRPVLAMIVDDGILPPILPM
ATAFARAARLIALEPAADWLRRLAALVEGGEPAAVDAARRLRLSRQETGRLVAMAGPWTP
ADLPQGGRALRDRLHALGAEPLRDRALLAAAAGLDRDGTVRDIVAAAAVTERPVFPLKGR
DLVGLGLARGPQMAQALATVAAWWAAGDYAADREACLAQARALLASG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccgcggctgcctgctgccgcagccctggatgaccgcgtcggcgacccggcgg
gtgatggcggccgtggccggcggcggcgggcgggcgcgcttcgtcggcggcatggtgcgc
gacgcgctgctcggccggccgatctccgacatcgacctcgccaccgacctggacccggag
cgggtgatgggccggctggtggccgacggcatccgggtcatcccgaccggcctcgcccac
ggcaccgtcaccgcggtcgtgggcggccggcatttcgagatcaccaccctgcgccgggac
gtggagaccgacgggcgccacgcccgcatcgcctataccgacgactgggccgaggatgcg
cgccgccgcgacttcacgatcaatgccctctttgccgacggcgacggcaccttctacgat
ccggccgggggcctcgacgatctggtgctgcggcgggtgcgattcgtgggcgacccggac
cagcgtatccacgaggatgtcctgcgcctgctgcgctactaccggatgctggcgcggctt
gggatccatggcttggacgctccctcgcgggctgcctgccggcgccatgcggggcggctg
ccggcgttgtccggggagcgggtgcgcggcgaggtggagcgcatcctgtccgtggcggac
ccgcgcccggtattagcgatgatcgtcgacgacggcatcctgccgccgatcctgccgatg
gcgacggcgttcgcgcgtgcggcccgcctgatcgcgctcgagccggcggccgactggctg
cgccgcctggcggccctggtcgagggcggcgagccggcggccgtcgatgccgcccgccga
ctgcgcctgtcgcgccaggaaaccgggcggctggtcgcgatggccgggccgtggaccccg
gccgacctgccgcagggcggccgcgccctgcgcgatcgcctgcacgcgctgggcgccgag
cctctgcgcgaccgggccctgctggccgctgccgccgggctcgaccgggacggaacggtg
cgggacatcgtggccgcggcggcggtcacggagcggccggtctttcccttgaagggccgc
gacctcgtcggcctgggcctcgcccgcgggccgcagatggcccaggcgctggcgaccgtc
gccgcctggtgggccgcgggcgactatgccgccgatcgcgaggcgtgcctggcccaggcc
agggcacttctggcaagcgggtaa
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