Stella vacuolata: STVA_05640
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Entry
STVA_05640 CDS
T06335
Symbol
groL1_1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
svc
Stella vacuolata
Pathway
svc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STVA_05640 (groL1_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svc03019
]
STVA_05640 (groL1_1)
03110 Chaperones and folding catalysts [BR:
svc03110
]
STVA_05640 (groL1_1)
03029 Mitochondrial biogenesis [BR:
svc03029
]
STVA_05640 (groL1_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svc04147
]
STVA_05640 (groL1_1)
Enzymes [BR:
svc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
STVA_05640 (groL1_1)
Messenger RNA biogenesis [BR:
svc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
STVA_05640 (groL1_1)
Chaperones and folding catalysts [BR:
svc03110
]
Heat shock proteins
HSP60 / Chaperonin
STVA_05640 (groL1_1)
Mitochondrial biogenesis [BR:
svc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
STVA_05640 (groL1_1)
Exosome [BR:
svc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
STVA_05640 (groL1_1)
Exosomal proteins of other body fluids (saliva and urine)
STVA_05640 (groL1_1)
Exosomal proteins of breast cancer cells
STVA_05640 (groL1_1)
Exosomal proteins of colorectal cancer cells
STVA_05640 (groL1_1)
Exosomal proteins of bladder cancer cells
STVA_05640 (groL1_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BBK40544
LinkDB
All DBs
Position
579541..581184
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVKFSTDARDRMLRGVDILANAVKVTLGPKGRNVVLDKAFGAPRITKDGVTVAKEI
ELADKFENMGAQMVREVASKTNDTAGDGTTTATVLAQAIVREGCKAVAAGMNPMDLKRGI
DLAVEAIVADVKKRSKKISTTDEVAQVGTISANGEREIGLMIAKAMQKVGNEGVITVEEA
KSLETELDVVEGMQFDRGYISPYFITNAEKMTTELEAPYILLFEKKLSGLQAMLPVLEAV
VQSGKPLLIVAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDMAILTGGTL
ISEDLGIKLETVTVDMLGKAKRVLINKENTTIIDGSGKKKDIEARCQQIRAQVEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGIVAGGGTALL
YATKALASLKPANDDQKVGIDIVRRAIQAPVRQIAENAGFDGAVVAGKLLEQKDFNFGFD
AQTGEYRDLVKAGIIDPTKVVRTALQDAASVAGLLVTTEAMIAERPEKKAPPMPGGGGMG
GMGDMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaggaagttaagttctcgaccgacgcgcgcgaccggatgctgcgcggcgtc
gacattctcgccaacgccgtgaaggtgacgctgggcccgaagggccgcaacgtcgtcctc
gacaaggcgttcggcgcgccgcggatcaccaaggacggcgtcaccgtcgccaaggagatc
gagctggccgacaagttcgagaacatgggcgcgcagatggtgcgcgaagtggcctcgaag
accaacgacaccgccggtgacggcaccacgacggcgaccgtgctggcccaggccatcgtc
cgcgagggctgcaaggccgtcgccgccggcatgaacccgatggacctgaagcgcggcatc
gacctggccgtcgaggccatcgtcgccgacgtgaagaagcgctccaagaagatctcgacc
accgacgaagtggcccaggtcggcaccatctccgccaacggcgagcgcgagatcggcctg
atgatcgccaaggcgatgcagaaggtcggcaacgagggcgtgatcacggtcgaagaggcg
aagagcctggagaccgagctcgacgtcgtcgagggcatgcagttcgaccgcggctacatc
tcgccctacttcatcacgaacgccgagaagatgacgacggagctcgaagccccgtacatc
ctcctgttcgagaagaagctgtcgggcctgcaggcgatgctgccggtcctcgaagccgtg
gtgcagtcgggcaagcccctgctgatcgtggccgaggacgtggaaggcgaggccctggcc
acgctggtcgtcaacaagctgcgcggcggcctcaaggtcgcggccgtgaaggcgccgggc
ttcggcgatcgccgcaaggcgatgctggaggacatggcgatcctgaccggcggcaccctg
atctccgaagacctcgggatcaagctggagacggtcaccgtcgacatgctgggcaaggcc
aagcgggttctcatcaacaaggagaacacgacgatcatcgacggctcgggcaagaagaag
gacatcgaggcccgttgccagcagatccgcgcccaggtcgaggagaccacctcggactat
gaccgcgagaagctgcaggagcgtctggccaagctggcgggcggcgtcgcggtgatccgc
gtcggcggcgccaccgaggtcgaggtgaaggagcgcaaggatcgcgtcgacgatgcgatg
cacgccacccgcgccgcggtcgaggaaggcatcgtggcgggcggcggcacggcgctgctg
tacgcgaccaaggccctggcctcgctgaagccggccaacgacgaccagaaggtcggcatc
gacatcgtccgtcgggcgatccaggcgccggtccgtcagatcgccgagaacgccggcttc
gacggtgcggtggtcgcgggcaagctgctcgagcagaaggacttcaacttcggcttcgac
gcccagacgggcgagtatcgcgacctggtgaaggccggcatcatcgacccgaccaaggtc
gtgcgcacggcgctgcaggacgcggcctcggtggccggtcttctcgtcacgaccgaggcg
atgatcgccgagcgtcccgagaagaaggcccccccgatgccgggcggtggcggcatgggc
ggcatgggcgacatggatttctga
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