Stella vacuolata: STVA_06170
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Entry
STVA_06170 CDS
T06335
Name
(GenBank) diguanylate phosphodiesterase
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
svc
Stella vacuolata
Pathway
svc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
STVA_06170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svc02000
]
STVA_06170
Transporters [BR:
svc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
STVA_06170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BBK40597
LinkDB
All DBs
Position
complement(640125..641792)
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AA seq
555 aa
AA seq
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MFRTLLATVLTACMAWAAAAAPGPDKDELVIGITQFPSTLHPNIESMLAKSYVLGLTRRP
FTAYDKDWKLVCLLCVELPTVENGLARPVDLPNGKRGVEVTYTIQPGATWGDGVPVTTKD
VVFTWEVGRHPQSGVAAAEFYRRVTKVEVKDERTFTFHVDKLSFEFASIGGFQLLPAHLE
REAFADPTQYRFRTRFDTDPTNPGLHFGPYRIVEVATGSHIALERNPHWYGPKPHFRRIV
VRAIENTAALEANLLSGAVDYVAGELGLSLDQAMAFEARHRDRYTVLYKPGLVYEHMDVN
LDNPILADRRVREALLLAIDREKLTRTLFGGRQPVARGAIHPLDWVHAEDLPAYAFDPKA
AGALLDAAGWPRKGTGIRQNASGERLTIELMTTAGNRGRELVQQVLQSQWRQVGIEVKLR
NEPPRVFFGETVSKRRFSGLALFAWLSAPEGVPRTTLHSESIPGPANNFSGQNYPGYANA
EMDGLIEKIEVELDRERRRKLWHAQQHLYARDLPALPLFFRADPFVLPKWLTGVEPTGHQ
YPTTLWVENWGVAAP
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgttccggacgctgctggctaccgtcctgacggcgtgcatggcatgggcggccgccgcc
gcccccggcccggacaaggacgagctggtcatcggcatcacccagttcccctcgaccctc
caccccaacatcgagagcatgctggccaagagctacgtgctcggcctgacccggcggccc
ttcaccgcctatgacaaggactggaagctcgtctgcctgctgtgcgtcgagctgccgacg
gtcgagaacggcctggcccggcctgtagacctgccgaacggcaagcgcggggtcgaggtc
acctacaccatccagccgggcgccacctggggcgacggcgtgccggtgacgaccaaggac
gtggtcttcacctgggaggtcggccgccacccgcagagcggggtcgccgcggccgagttc
tatcggcgggtgacgaaggtggaggtcaaggacgagcgcaccttcaccttccatgtcgac
aagctgtcgttcgagttcgcctcgatcggcggcttccagctgctgcccgcccacctggag
cgcgaggccttcgccgacccgacgcagtaccgcttccgcacccgcttcgacaccgacccg
accaatcccggcctgcatttcggcccctaccgcatcgtcgaggtggcgaccggctcgcac
atcgcgctggagcgcaacccgcactggtacgggccgaagccgcatttccgccgcatcgtc
gtgcgtgcgatcgagaacaccgccgcgctcgaggccaacctgctgtccggcgcggtcgac
tacgtcgcgggcgaactcggcctgtcgctcgaccaggcgatggccttcgaggcccggcac
cgcgaccgctacaccgtcctctacaagccggggctcgtctacgagcacatggacgtcaac
ctcgacaacccgatcctggccgaccgccgggtgcgcgaggcgctgctgctggcgatcgac
cgcgagaagctgacccggaccctgttcggcggccgccagccggtcgcccgcggcgcgatc
cacccgctcgactgggtccatgccgaggacctgccggcctacgccttcgaccccaaggcg
gcaggcgccctgctggacgccgccggatggccgcgcaaggggaccggcatccgccagaac
gcctcgggcgagcgcctgacgatcgagctgatgaccacggccggcaaccgcggccgcgaa
ctggtgcagcaggtgctgcagagccagtggcggcaggtcggcatcgaggtgaagctgcgc
aacgagccgccgcgcgtcttcttcggcgaaacggtgtccaagcgccgcttcagcgggctt
gccctgttcgcctggctgtcggcccccgagggggtgccgcgcacgaccctgcactccgaa
agcatccccgggcccgccaacaatttctccggccagaactatccgggctatgccaacgcc
gagatggacgggctgatcgagaagatcgaggtcgagctggaccgcgagcggcggcggaag
ctctggcacgcgcagcagcacctctacgcccgcgacctgccggcactgccgctcttcttc
cgcgccgacccgttcgtgctgcccaagtggctgacaggggtcgagccgaccggccaccag
tacccgaccacgctgtgggtcgagaactggggcgtcgccgcgccatga
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