Allostella vacuolata: STVA_07370
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Entry
STVA_07370 CDS
T06335
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
svc
Allostella vacuolata
Pathway
svc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STVA_07370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svc03019
]
STVA_07370
Enzymes [BR:
svc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
STVA_07370
Messenger RNA biogenesis [BR:
svc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
STVA_07370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Utp25_C
P-loop_SecA
AAA_22
Flavi_DEAD
AAA_19
Fe-ADH
Cas3-like_C_2
CMS1
DUF8086
Motif
Other DBs
NCBI-ProteinID:
BBK40717
LinkDB
All DBs
Position
complement(764103..765407)
Genome browser
AA seq
434 aa
AA seq
DB search
MTQFSDLGLAAPLLKALTDEGYVTPTPIQAQAIPYVLAGRDLLGIAQTGTGKTAAFALPI
LHRLDADRRQPVRKGCRVLVLSPTRELASQIAESFRTYGRHIGVRVALAFGGVPLGAQIR
ALANGVDVLVATPGRLIDHLDTGACRLDQVEMIVLDEADHMLDMGFIHAVRRIVRALPHK
RQSLFFSATMPKEIGALAGDLLRDPARVEVAPVATTAERVEQRMIFAEQGQKPALLVGLV
KELNPRLMLVFTRTKHGADRVVRHLEQAGIESAAIHGNKSQSQREKALAAFRAGKTRILV
ATDIAARGIDVDGVSHVINFDLPNIPESYVHRIGRTARAGADGIAIGFCSGEEKAFLKDI
EKLIGQKVTPMGSPVELPTARPSSPSTAQRPSGGHNASSQGRRFGGAPGATSGRPSQGRP
ARRPQQSQRTVASR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
ttgactcagttctccgacctcggcctcgcggcgccgctcctgaaggcgctcaccgacgaa
ggttacgtcacgcccacgccgatccaggcgcaggccatcccctacgttctcgccgggcgc
gacctgctcggcatcgcccagaccggcaccggcaagaccgccgccttcgccctgcccatc
ctccatcgcctggatgccgaccggcgccagcccgtgcgcaagggctgccgcgtcctcgtc
ctgagcccgacccgcgagctggcgagccagatcgccgagagcttccgcacctatggccgc
cacatcggcgtgcgggtggcgctggccttcggcggcgtgccgctgggcgcccagatccgc
gcgctggccaacggcgtcgacgtgctggtcgccacccccggccgcctgatcgaccatctc
gacaccggcgcctgccgcctcgaccaggtcgagatgatcgtcctcgacgaggccgaccac
atgctcgacatgggcttcatccatgccgtgcgccgcatcgtccgcgccctgccgcacaag
cgccagagcctgttcttctcggccaccatgccgaaggagatcggggcgctggccggcgac
ctgctgcgcgacccggcccgggtcgaggtggccccggtcgcgaccacggccgagcgcgtc
gagcagcgcatgatcttcgccgagcagggccagaagccggccctgctggtcggcctggtc
aaggagctgaacccgcgcctgatgctggtcttcacccgcaccaagcacggcgccgaccgg
gtcgtccgccatctcgagcaggcgggcatcgaatcggccgcgatccacggcaacaagagc
cagagccagcgcgagaaggcgctcgccgccttccgcgccggcaagacgcggatcctggtg
gcgaccgacatcgccgcccgcggcatcgacgtcgacggcgtctcgcacgtcatcaacttc
gacctgccgaacatcccggagagctatgtccatcgcatcggccgcaccgcgcgcgccggc
gccgacggcatcgccatcggcttctgcagcggcgaggaaaaggcgttcctcaaggacatc
gagaagctgatcggccagaaggtgaccccgatgggctcgccggtcgagctgccgacggcc
cgcccgtccagcccgtccaccgcccagcgtccgtccgggggccacaacgcctccagccag
ggccgccgcttcggcggagcccccggcgccacctccggccgcccctcccagggtcgcccg
gcgcgccggccccagcagtcgcagcggaccgtcgcgtcccgctga
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