Stella vacuolata: STVA_11450
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Entry
STVA_11450 CDS
T06335
Symbol
ku_1
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
svc
Stella vacuolata
Pathway
svc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
STVA_11450 (ku_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svc03400
]
STVA_11450 (ku_1)
DNA repair and recombination proteins [BR:
svc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
STVA_11450 (ku_1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
BBK41125
LinkDB
All DBs
Position
1209690..1210496
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AA seq
268 aa
AA seq
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MPPSRAFWKGYLKLSLVTCPVAMTPAITDGEKIRFRTLNRSTGNPIISRYVDGETGEPVE
DDDAVMGYETAQDEFVLLEEDELEAVQLESTRTIDIRQFVPRESVGSIWRDRPHYLVPDD
KVGEEAFAVIRQGMVETRTAGLSQVVLYRRERRVLLEPRDRGIVLWTLRDAGQVRDADEY
FGKLKEEAAPKDMLKVARSVIAERTRAWDASMLGDRVQDRLHEIIAAKQKGAKPAKRKAP
AEGRSAGNVIDIMDALRRSLAGERKPKR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgccaccctcgcgtgcgttctggaagggctacctgaagctgtcgctggtcacctgcccg
gtggccatgaccccggcgataacggacggcgagaagatccggttccgcaccctgaaccgg
tcgaccggcaacccgatcatcagccgctatgtcgacggcgagaccggggagccggtcgag
gatgacgacgcggtgatgggctacgagaccgcgcaggacgagttcgtcctgctcgaggag
gacgaactcgaggcggtgcagctggaaagcacccggaccatcgacatccggcagttcgtg
ccgcgcgagtcggtcggcagcatctggcgcgaccgcccgcactatctggtcccggacgac
aaggtcggcgaggaagcgttcgcggtcatccgccagggcatggtcgagacccgcaccgcc
ggcctgtcgcaggtcgtcctctaccggcgcgagcgccgcgtcctgctggagccgcgcgac
cgggggatcgtgctgtggaccctgcgcgatgcgggccaggtgcgggatgcggatgagtat
ttcggcaagctcaaggaagaggctgcccccaaggacatgctgaaggtcgcccgctcggtg
atcgcggagcgcacccgcgcctgggacgcctcgatgctgggcgaccgggtgcaggatcgc
ctgcacgagatcatcgccgccaagcagaagggggccaagccggcgaagcgcaaggccccg
gccgagggccgctcggccggcaacgtcatcgacatcatggacgcgctgcgccgcagcctg
gccggggagcgcaagcccaagcggtag
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