Stella vacuolata: STVA_13260
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Entry
STVA_13260 CDS
T06335
Name
(GenBank) ATPase AAA
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
svc
Stella vacuolata
Pathway
svc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
STVA_13260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svc03019
]
STVA_13260
03009 Ribosome biogenesis [BR:
svc03009
]
STVA_13260
04131 Membrane trafficking [BR:
svc04131
]
STVA_13260
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
svc04147
]
STVA_13260
Messenger RNA biogenesis [BR:
svc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
STVA_13260
Ribosome biogenesis [BR:
svc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
STVA_13260
Membrane trafficking [BR:
svc04131
]
SNARE
SNARE associated proteins
Others
STVA_13260
Autophagy
Aggrephagy
Other aggrephagy associated proteins
STVA_13260
Exosome [BR:
svc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
STVA_13260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_33
AAA_2
AAA_5
TIP49
AAA_22
AAA_14
AAA_18
nSTAND3
AAA_28
CDC48_2
Mg_chelatase
IstB_IS21
AAA_lid_PRS2_C
RNA_helicase
ATPase
AAA_7
Parvo_NS1
AAA_17
Zeta_toxin
Sigma54_activat
SLFN-g3_helicase
AAA_19
PhoH
RNase_II_C_S1
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
BBK41306
LinkDB
All DBs
Position
1395813..1397924
Genome browser
AA seq
703 aa
AA seq
DB search
MADEPEPFAFRVCEAPTRDVGRGLIRLDPEDMTRLGVEVGDVVSILGRRATVARVMPAHM
DMRRQSLVQMDGLARVNAGASLDERVVLSPAAVTRARAVTLNPVGGRVQAPEPRLLARLL
DGIPLLAGDRVRTALVGAQIREFTVESTDPLGPVMIGPDTRIRCLDGTAESNAITYEDVG
GLRNEVRRIREMIELPLKHPEVFQHLGIDPPKGVLLCGPPGTGKTLIARAVAREANVHFI
HLNGPEIIDKMYGASEAQLRRIFDDAEKNAPSIIFIDELDAIAPKREEMSGDRQVERRVV
AQLLGLMDGLQARGQVIVIAATNIPNAIDPALRRPGRFDREILVGVPDENGRREILEIHT
RGMPLAADADLGRLAFLTPGFVGADLAALCREAAMIALRRLIPDISFEDGRISEEKLAAL
VVTAADFAAAQAGTQPSALREIVTLASHKRWTDVGGLDDIKRLLVEAVEWPMRHADLYAE
AGIQPPKGILFYGVPGTGKTLLAKALAGESGANFIAVKGPQLLSMWAGESERGVREVFRK
ARQTAPCIVFFDEIDTLTPNRGGLGNGITDRVVAQLLTEIDGIEDLRGVTVVAATNRLDQ
IDAALLRPGRFDFLVEFRAPDVATRRAILDVHAGRMPLDPTVDLAALAEATAGMVGADLE
ALCRHAGIAAIRDVVTEQNAVALRVERRHFDEALVVLRRGSEA
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgaaccagagccctttgcctttcgcgtatgcgaggcgccgacccgggacgtg
ggccgggggctgatccggctcgatccggaagacatgacccggctcggggtcgaggtcggc
gacgtggtctccattctcggccgccgggcgaccgtggcgcgggtcatgccggcgcacatg
gacatgcgccggcagagcctcgtccagatggacgggctcgcgcgggtcaatgcgggggcg
agcctcgacgagcgggtggtgctgagcccggcggcggtgacgcgggcgcgtgccgtgacc
ctcaatcccgtgggggggcgcgtccaggcgccggaaccgcgcctgctcgcccgtctcctc
gacggcatcccgctgctcgccggcgaccgggtgcgcacggcgctggtgggcgcccagatc
cgggaattcacggtggagagcaccgacccgctcgggccggtgatgatcgggcccgacacc
cggatccgctgcctggacggcaccgccgagagcaatgccatcacctacgaggatgtgggc
gggctgcgcaacgaggtgcggcgcatccgcgaaatgatcgagctgccgctgaagcatccg
gaggtcttccagcatctcggcatcgatccgcccaagggcgtgctgctgtgcggcccgccc
ggcaccggcaagacgctgatcgcccgcgccgtggcgcgcgaggccaacgtccatttcatc
cacctcaacggcccggagatcatcgacaagatgtacggggcgagcgaggcccagctgcgc
cgcatattcgacgatgcggaaaagaacgcgccgtccatcatcttcatcgacgaactcgac
gcgatcgccccgaagcgcgaggagatgagcggcgatcgccaggtggagcgccgggtggtg
gcgcagctgctcggcctgatggacggcctgcaggcgcgcggccaggtgatcgtcatcgcc
gcgaccaacattcccaacgccatcgatcccgccctgcgccggccgggccggttcgaccgc
gagatcctggtgggggtgccggacgagaacggccgccgggagatcctggagatccatacc
cgcggcatgccgctcgcggccgatgccgacctcgggcgactcgccttcctcacccccggc
ttcgtcggcgcggatctggccgcgctgtgccgcgaggcggcgatgatcgccctgcggcgc
ctgatccccgacatcagtttcgaggatgggcggatctcggaggagaagctggccgcgctc
gtcgtgaccgccgccgatttcgccgccgcccaggccggcacccagccgagcgcgctgcgc
gagatcgtcaccctggcctcgcacaagcgatggacggacgtcggcggcctcgacgacatc
aagcggctcctggtggaggcggtggaatggccgatgcggcacgccgacctctatgccgag
gccggcatccagccgcccaaggggatcctgttctatggcgtgccgggcaccggcaagacc
ctgctggccaaggcgctcgcgggcgagagcggcgccaacttcatcgccgtcaagggaccc
cagctcctctccatgtgggcgggggagtccgagcgcggggtgcgcgaggtgttccgcaag
gcgcgccagaccgcgccctgcatcgtcttcttcgacgagatcgacaccctgaccccgaac
cgcggcggccttggcaatgggataacggaccgggtggtcgcccagctgctgaccgagatc
gacggcatcgaggacctgcgcggcgtcaccgtggtcgcggcgaccaaccgtctcgaccag
atcgacgccgccttgctccggcccggccggttcgacttcctggtcgagttccgggccccg
gacgtcgcgacccgccgcgccatcctggatgtgcatgccggccggatgccgctcgatccc
accgtggaccttgcggccctggccgaggcgacggccggcatggtgggggccgacctcgag
gcgctgtgccgccacgccgggatcgccgcgatccgcgatgtcgtgacggagcagaacgcg
gtcgcgctccgggtggagcgacggcatttcgacgaggcgctggtcgtgctccggcgcggg
agcgaggcatga
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integrated database retrieval system
