Stella vacuolata: STVA_17640
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Entry
STVA_17640 CDS
T06335
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
svc
Stella vacuolata
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
svc03016
]
STVA_17640 (rnd)
Enzymes [BR:
svc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
STVA_17640 (rnd)
Transfer RNA biogenesis [BR:
svc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
STVA_17640 (rnd)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
BBK41744
LinkDB
All DBs
Position
complement(1873228..1874388)
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AA seq
386 aa
AA seq
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MTLIADTESLLAFCQRQAGTDYVAVDTEFMRDKTYWPQLCLVQVAGPQEAVAIDPLAPGM
DLAPLLDLLYDERIVKVFHAARQDIEIFFHLTGRIPEPLFDTQVAAMVCGFGEAVSYENL
ATKLAGARIDKSSRFTDWAQRPLTTRQLTYALSDVTHLRPTYEKLRRRLEKSGRGEWLDE
EMNILLEPGTYRLQPVDAWKRFKIRGGSGRFLAVLQEIAAWRERTAQDKDMPRGRILRDE
ALLEIAAHHPATVDDLARTRGLGKGLAEGRFGTEILEAVRRGLALPEVDLPKPPPRQDMP
PGLGPLCDLLRVLLKMKCEEHDVAQKLVASADDLERIAASDDADVPALEGWRREVFGQHA
LALKHGKLGLTAHGRSIAVVGLGDAA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttatcgccgacaccgaatccctcctcgccttctgccagcggcaggccggcacc
gactatgtcgcggtcgacaccgaattcatgcgcgacaagacctactggccacagctctgc
ctggtgcaggtggccggcccccaggaggcggtcgcgatcgacccgctggcgccgggcatg
gacctggcaccgctcctggacctgctctacgacgagcgcatcgtaaaggtcttccatgcc
gcccggcaggacatcgagatcttcttccacctgacggggcgcattccggagccgctgttc
gacacccaggtggcggccatggtctgcggcttcggcgaggcggtgtcctacgagaacctc
gccaccaagctggcgggcgcacgcatcgacaagtcgtcgcgcttcaccgactgggcgcag
cggcccctgaccacccggcagctcacctatgcgctctcggacgtgacgcacctgcgcccg
acctacgagaagctgcgccgccggctcgagaagtccggccgcggcgagtggctggacgag
gagatgaacatcctgctggagcccggcacctaccggctgcagccggtcgatgcctggaag
cgcttcaagatccgcggcggcagcggccggttcctggccgtcctgcaggagatcgccgcc
tggcgggagcggaccgcccaggacaaggacatgccgcgcgggcgcatcctgcgcgacgag
gcgctgctggagatcgcggcccaccacccggccaccgtcgacgacctggcccgtacccgc
gggctcggcaagggattggccgagggccggttcgggacggagatcctggaggcggtgcgg
cgcggcctggccctgccggaggtcgacctgcccaagccgccgccgcgccaggacatgccg
cccgggctggggccgctctgcgacctgctgcgcgtcctcctgaagatgaagtgcgaggag
cacgacgtcgcccagaagctggtggcctcggccgacgacctggagcggatcgccgcctcc
gacgatgccgacgtcccggcgctggagggctggcggcgcgaggtgttcggccagcacgcg
cttgccctgaaacacggcaagctcggcctgaccgcccacggccgctcgatcgccgtggtc
ggcctcggggacgccgcctag
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