Stella vacuolata: STVA_19810
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Entry
STVA_19810 CDS
T06335
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
svc
Stella vacuolata
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svc03032
]
STVA_19810 (topA)
03400 DNA repair and recombination proteins [BR:
svc03400
]
STVA_19810 (topA)
Enzymes [BR:
svc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
STVA_19810 (topA)
DNA replication proteins [BR:
svc03032
]
Prokaryotic type
DNA Topoisomerases
STVA_19810 (topA)
DNA repair and recombination proteins [BR:
svc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
STVA_19810 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
BBK41961
LinkDB
All DBs
Position
complement(2120839..2123580)
Genome browser
AA seq
913 aa
AA seq
DB search
MNVVVVESPAKAKTINKYLGPDFQVLASYGHVRDLPAKDGSVDPEQDFSMLWEVDGRSEK
HLRAIAEATRGASHLYLATDPDREGEAISWHVREVLEQRRALKGVEVQRVVFNEITKTAI
IEAFKHPRALNRELVDAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRLVCER
EAEIEAFKPQEYWTVEATFQTEEGNKFTARLTHLAGRKLEKLDIATAAAAAAAVAAVEAR
SFHIGPVERKQVRRHPPPPFTTSTLQQEASRQLGMTASRTMRTAQRLYEGVDIGGETVGL
ITYMRTDGVQISGEAIAAARRLIHSRYGEKFVPDAPRVYRTQAKNAQEAHEGIRPTDMFR
APEEVARQLSDEERRLYELIWRRTVASQMESALLEQVGADLLSGDRQVTMRATGSTLLFE
GFLKLYREGRDDAEEDEADRRLPPLTDGAGVERLAVASDQHFTQPPPRYSEASLVKRLEE
LGIGRPSTYASIIEVLQDRGYVRLDRKRFIPEDRGRLVTAFLTGFFEKLVQYNFTAELET
GLDAVSDGRTDWRQLLRDFWKDFNAQIAQTKDLSIKDVVSALDEDLGRHFFPETGEGGRD
PRACPTCGDGRLGLKLGKFGAFIGCSNYPECRYTRPLAIESGEGNGSAEGDPNVPRKLGE
DPETGLPVWMRKGPYGQYVQLGDAEGDAKPKRQSIPKGVPLADVTLDMALRLLALPRTVG
NHPETGDPILAGIGRFGAYVKHGPTYKSIGSGDDVLTIGLNRAVDLLASAPGRGRQPGRP
VGDHPADGKPITVHAGKYGPYVQHGEIRATLPKGMEAEAVTVAVALPLLAERAAKAPAKP
AGRRTAAAPRKKPAAAKAEAAETKPAAAKKAAAKPKAPAKGKAKSTPTKAAAAKATAPKS
RTKPKAPAPPEEV
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcgtcgtcgtcgaatcgccggccaaggccaagacgatcaacaagtaccttgga
ccggatttccaggtgctcgccagctatggccatgtccgcgacctgcccgccaaggacggc
tcggtcgaccccgagcaggacttctccatgctgtgggaggtcgacggccgttcggagaag
cacctgcgggcgatcgccgaggcgaccaggggtgcgtcccatctctatctcgccaccgac
cccgaccgcgagggcgaggcgatctcctggcatgtccgcgaggtgctggagcagcgccgc
gcgctgaagggggtagaggtccagcgcgtcgtcttcaacgagatcaccaagacggccatc
atcgaggcgttcaagcatccccgcgccctcaaccgagagttggtggacgcctatctcgcc
cggcgcgcgctcgactacctggtcggcttcaccctgtcgccggtcctgtggcgcaagctg
cccggcagccgctcggccggccgcgtgcaatcggtggcgctgcgcctggtctgcgagcgc
gaggccgagatcgaggccttcaagccgcaggagtactggacggtcgaggcgaccttccag
accgaggaaggcaacaagttcaccgcccgcctgacccatctggccggccgcaagctggag
aagctcgacatcgccacggcggcggcggccgccgccgcggtcgccgcggtcgaggcgcgc
agcttccatatcggcccggtcgagcgcaagcaggtgcgccgccacccgccgccgcccttc
accacctccaccctgcagcaggaggcctcccggcagctcggcatgaccgcatcgcggacc
atgcggaccgcccagcggctctacgagggcgtcgacatcggcggcgagacggtcggcctc
atcacctatatgcgtaccgacggcgtgcagatctccggcgaggcgatcgccgctgcccgg
cgcctgatccacagccgctacggcgagaagttcgtgccggacgcgcccagggtctatcgc
acccaggccaagaacgcccaggaggcgcatgagggcattcgcccgaccgacatgttccgc
gccccggaggaagtggcccggcagctgtcggacgaggagcgccggctctacgagctgatc
tggcgccggacggtggccagccagatggaaagcgcgctgctggagcaggtcggcgccgac
ctgttgagcggcgaccgccaggtgacgatgcgggcgaccgggtcgaccctgctgttcgag
ggcttcctcaagctctatcgagagggccgcgacgacgccgaagaggacgaggccgaccgc
cgcctgccgccgctgaccgacggggccggcgtggaacggctcgccgtcgcctcggaccag
cacttcacccagccgccgccgcgctacagcgaggccagcctggtgaagcggctggaggaa
ctcggcatcggccgcccctccacctacgcctcgatcatcgaggtgctgcaggaccgcggc
tatgtccggctcgaccgcaagcgcttcatcccggaggaccgcggccggctggtgacggcg
ttcctcaccggcttcttcgagaagctggtgcagtacaacttcaccgccgagctggagacc
gggctcgatgcggtttcggacggccggaccgactggcgccagctgctgcgcgacttctgg
aaggacttcaacgcccagatcgcccagaccaaggacctgtccatcaaggacgtggtgtcc
gcgctggacgaggatctgggccgccacttcttcccggagaccggcgaaggcggccgcgac
ccgcgggcctgcccgacctgcggcgacggccggctcggcctcaagctcggcaagttcggc
gccttcatcggctgctccaactacccggagtgccgctacacccggccgctggcgatcgag
agcggcgagggcaacggcagcgccgagggcgaccccaacgtgccgcgcaagctgggcgag
gatccggagaccggcctgccggtgtggatgcgcaagggcccctacgggcagtatgtccag
ctgggcgatgccgagggcgatgccaagcccaagcggcagtcgattcccaagggcgtgccg
ctggccgacgtcaccctcgacatggcgctgcgcctgctggccctgccgcgcaccgtcggc
aaccatccggagaccggcgacccgatcctggccggcatcggccgattcggcgcgtacgtg
aagcacgggccgacctacaagtcgatcggctccggcgacgacgtgctgacgatcggcctc
aaccgcgccgtcgacctgctggcctccgcgcccggccgcggccggcagcccggccggccg
gtcggcgaccatccggcggacggcaagccgatcaccgtccatgccggcaagtacggcccc
tatgtccagcacggcgagatccgcgccaccctgcccaagggcatggaggccgaggccgtg
acggtggcggtcgccctgccgctgctggcggaacgtgccgccaaggcgccggccaagccc
gccggccggcgcacggccgccgccccgcgcaagaagccggccgcggcgaaggccgaggcc
gccgagaccaagcctgccgccgcgaagaaggccgcggccaagccgaaggcgccggccaag
ggcaaggccaagtccacaccgaccaaggctgccgccgcgaaggcaaccgcaccgaagagc
aggaccaagcccaaggcccctgccccgcccgaagaggtctag
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