Stella vacuolata: STVA_23140
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Entry
STVA_23140 CDS
T06335
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
svc
Stella vacuolata
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svc03021
]
STVA_23140 (rpoH)
Transcription machinery [BR:
svc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
STVA_23140 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
wHTH-HSP90_Na-assoc
DUF6561
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BBK42294
LinkDB
All DBs
Position
2491217..2492128
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AA seq
303 aa
AA seq
DB search
MMATTLALPSVGSDGNLTRYLQEIRRFPMLEQDQEYMLAKRWREHEDTDAAHRLVTSHLR
LVAKIAMGYRGYGLPLSELISEGNVGMMQAVKRFDPERGFRLATYAMWWIRAAIQEYILH
SWSLVKMGTTAAQKKLFFNLRKLKGQMQAIDEGDLSPEQVAKIAKELGVPEADVISMNRR
LGAPDHSLNAPLRTDGDGEWQDWLVDDSDSQETTLAESEELGKRRKLLGDAMKSLNERER
HILVERRLKDEPTTLEDLSQQYSISRERVRQIEVRAFEKLQKSIKSAAIQQGLASQANLL
QMR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgacgacccttgcactgcccagcgtcggaagtgacggaaacctgacccggtat
ctccaggagatccggcggtttcccatgctggaacaggaccaggagtacatgctcgccaag
cgctggcgcgagcatgaggataccgatgccgcgcaccgtctggtgacgagccatctgcgt
ctcgtcgccaagatcgccatgggctatcggggatatgggctgcctttgtccgagctgatc
tccgagggcaatgtcggcatgatgcaggccgtgaagcgcttcgatcccgagcgcggcttc
cgcctggcgacctatgccatgtggtggatccgggccgcgatccaggagtacatcctgcac
tcctggtccctggtgaagatgggtacgacggccgcgcagaagaagctctttttcaatctg
cgcaagctcaagggccagatgcaggcgatcgacgagggcgacctgtcgcccgagcaggtg
gccaagatcgccaaggagctgggcgtgcccgaggccgacgtgatcagcatgaaccggcgc
ctcggcgccccggatcattcgctgaacgcgccgctgcgcaccgacggcgacggcgagtgg
caggactggctggtggatgattccgacagccaggagacgacgctggccgagagcgaggag
ctgggcaagcgccgcaagctcctcggcgacgccatgaagtccctcaacgagcgcgagcgc
cacatcctggtcgagcgccggctgaaggacgaaccgacgacgctggaagacctcagccag
cagtacagcatcagccgtgagcgcgtgcgccagatcgaggtgcgggcgttcgagaagctg
cagaagtcgatcaagtcggcggcgatccagcaggggctggcgagccaggccaacctgctg
cagatgcgctga
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integrated database retrieval system
