Stella vacuolata: STVA_33010
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Entry
STVA_33010 CDS
T06335
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
svc
Stella vacuolata
Pathway
svc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
STVA_33010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svc02000
]
STVA_33010
Transporters [BR:
svc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
STVA_33010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
OpuAC
FbpC_C_terminal
Motif
Other DBs
NCBI-ProteinID:
BBK43281
LinkDB
All DBs
Position
complement(3519103..3520152)
Genome browser
AA seq
349 aa
AA seq
DB search
MDRRSFIVQAAALALALSSAPVLAQGKGEIVMGAWGGGTSATWRAGVAEPFTQATGIPVK
INEWPDPEPQIRAQRANPQYNMAVATYFNAANLHRDGLLETFDPADFPDLKHVPESYKMK
AADGRLIGIPAYFQYYGIAVNTDLAKVSDFQSWNDLANPKWKGKLSVTRPIYGSTYDLVI
FAKIAGGDEKNIEPGIPLLKALGANALNVYNSMAHLNTLLTRGEVTAAPYYVTRVWGLKK
SGVKNIEFVLPKEGSLAIPYILVVPKGAKHPEAYKAFLKSALESAQQAKMLDLSGYIPLN
TSTPISAEHEANFGMKLPALMDRLYQPDWDVIARTHKERVAMVEQLLSR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggatagacgttcgttcatcgtccaggcggcggcgctggccctcgcgctctcgtccgca
ccggtcctggcccagggcaagggcgagatcgtcatgggcgcctggggcggcggcaccagc
gccacctggcgcgccggggtggccgagcccttcacccaggcgaccggcatcccggtcaag
atcaacgagtggcccgacccggagccgcagatccgcgcccagcgggccaacccgcaatac
aacatggcggtcgcgacctacttcaacgcggccaacctgcatcgcgacggcctgctggag
acgttcgacccggccgacttccccgacctgaagcacgtgccggagagctacaagatgaag
gcggccgacgggcgcctgatcggcatcccggcctatttccagtattacggcatcgccgtg
aacacggacctcgccaaggtctccgacttccagtcgtggaacgacctggcgaacccgaaa
tggaagggcaagctgtcggtcacccggccgatctatggctcgacctacgacctcgtcatc
ttcgccaagatcgccggcggcgacgagaagaacatcgagccgggcatcccgctgttgaag
gcgctgggtgccaacgcgctcaacgtctacaactccatggcccacctcaacacgctgctg
acccgcggcgaggtgacggccgcgccctactacgtcacccgcgtctggggcctgaagaag
tcgggcgtgaagaacatcgagttcgtgctgcccaaggaaggcagcctcgccatcccctac
atcctggtggtgcccaagggcgccaagcatccggaagcctacaaggcgttcctgaagtcg
gcgctggagtcggcgcagcaggccaagatgctcgacctgtcgggctacatcccgctcaac
acctcgaccccgatctcggccgagcacgaggccaatttcggcatgaagctgccggccctg
atggaccggctgtaccagccggactgggacgtgatcgcgcggacccacaaggagcgggtc
gcgatggtcgagcagctgctgtcgcgctga
DBGET
integrated database retrieval system
