Stella vacuolata: STVA_38050
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Entry
STVA_38050 CDS
T06335
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
svc
Stella vacuolata
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svc03400
]
STVA_38050
DNA repair and recombination proteins [BR:
svc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
STVA_38050
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
BBK43785
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Position
4051325..4051744
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AA seq
139 aa
AA seq
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MDIIDREARSRLMARIRSKDTKPEMVVRRIAYRLGFRFRLHRRDLPGSPDLVFPGRRKVV
FVHGCYWHRHPGCRLAYEPKSNIEFWTGKFAANMTRDQKALQDLHDQGWDPLVIWECEVK
HSELVTSRLSAHLGPPEER
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atggacattatcgacagggaggcccggtcgcggctgatggcccgcatccgcagcaaggac
accaagcccgagatggtggtgcgacgcatcgcctacaggctgggcttccggttccgcctg
catcgcagggatctgccgggcagtcccgacctcgtgttccccggccggcggaaggtggtc
ttcgtccacgggtgctactggcatcggcatcccggttgccgcctagcctacgagcctaag
tcgaacatcgagttctggacggggaaattcgcggcaaacatgacgcgcgatcagaaagct
ctgcaagaccttcacgaccagggttgggatcccttggtaatctgggagtgcgaggttaaa
cattcggaacttgtaacttcgcgcctgtcggctcacctcggaccacctgaagagcgatga
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