Allostella vacuolata: STVA_39380
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Entry
STVA_39380 CDS
T06335
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
svc
Allostella vacuolata
Pathway
svc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
STVA_39380 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
svc03021
]
STVA_39380 (rpoA)
03400 DNA repair and recombination proteins [BR:
svc03400
]
STVA_39380 (rpoA)
Enzymes [BR:
svc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
STVA_39380 (rpoA)
Transcription machinery [BR:
svc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
STVA_39380 (rpoA)
DNA repair and recombination proteins [BR:
svc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
STVA_39380 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
BBK43918
LinkDB
All DBs
Position
complement(4201660..4202682)
Genome browser
AA seq
340 aa
AA seq
DB search
MLVIQKNWQQLIKPKKPNVEPGEDPKRVATVVAEPLERGFGLTLGNALRRVLLSSLQGAA
VTSMQIEGVLHEFSSIPGVREDVTDIVLNIKSLALRMHGDGPKRMRLKASGPGEVRAGQI
EAGHDIDVMNPDLVICTLDRDAKISMEFVVENGKGYVAAAQNRPEDAPIGLIPVDALYSP
VRKVTYKVDNTRVGQVTDYDKLSMRVETNGAVSPEDAVALAARILQDQLQIFINFEEPKP
ASEDVKAQEFPFNRNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKTEQEMLRTPNFGR
KSLNEIKEVLAQMGLHLGMEVTGWPPENIEDLAKRLEEPY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgatccagaagaactggcagcagctgatcaagccgaagaagccgaacgtcgag
ccgggtgaagacccgaagcgcgtggcgacggtggtggctgagccgctcgagcgcggtttc
ggcctcaccctgggcaacgctctgcgccgcgtgctgctgtcttcgctgcagggtgcggcg
gtgacctcgatgcagatcgagggcgtgctgcacgagttttcgtcgatccccggcgttcgc
gaggacgtgacggacatcgtcctcaacatcaagagcctggcgctgcggatgcacggcgac
ggcccgaagcggatgcgcctgaaggcatccggcccgggcgaggtgcgcgccggccagatc
gaggccgggcacgacatcgacgtgatgaaccccgacctcgtgatctgcacgctcgaccgc
gacgccaagatctccatggagttcgtggtcgagaacggcaagggctacgtcgccgccgcg
cagaaccggccggaagacgcgccgatcggcctgatcccggtcgacgcgctctacagcccc
gtgcgcaaggtgacctacaaggtcgacaacacccgcgtcggccaggtcaccgactacgac
aagctgtccatgcgggtcgagacgaacggcgcggtctcgccggaggacgcggtggcgctc
gccgcccgcatcctgcaggaccagctgcagatcttcatcaacttcgaggagccgaagccg
gcttccgaggacgtgaaggcccaggagttcccgttcaaccggaacctcctgcgcaaggtg
gacgagctggaactgtcggtccgctcggccaactgcctcaagaacgacaacatcgtctat
atcggcgacctcgtgcagaagaccgagcaggaaatgctgcgcacgccgaatttcggacgc
aagtcgctcaacgagatcaaggaagtcctggcccagatggggctccatctcgggatggaa
gtcaccggctggccgccggagaatatcgaagacctcgccaagcggctcgaagagccgtac
tga
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