Stella vacuolata: STVA_40980
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Entry
STVA_40980 CDS
T06335
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
svc
Stella vacuolata
Pathway
svc00730
Thiamine metabolism
svc01100
Metabolic pathways
svc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
STVA_40980 (thiC)
Enzymes [BR:
svc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
STVA_40980 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
BBK44078
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Position
complement(4362952..4364808)
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AA seq
618 aa
AA seq
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MPDTLSPANFGVTTGPLPASRKVHVAGGRDGSLRVAMREIDLDPGCGEPPVRVYDPSGPY
TDPAVAIDIAAGLPALRRDWILARGDVEPYPGRSVRPEDNGLKPGSAGTVPVFDRGDRRP
LVARPGCRPTQLAYARAGIVTPEMEYVAIRENLGRERALDAAARDGEGFGAAIPDFVTPE
FVRDEVARGRAIIPANINHPEAEPMAIGRNFLVKINANIGNSAVTSSVAEEVDKLVWAIR
WGADTVMDLSTGRNIHTIREWILRNAPVPIGTVPIYQALEKVGGRAEELTWEIYRDTLVE
QCEQGVDYFTIHAGVRLAHIPLTARRVTGIVSRGGSIMAKWCLAHHRESFLYTRFEEICE
IMRAYDVSFSLGDGLRPGSNADANDAAQFAELETLGELTQVAWRHDVQVMIEGPGHVPMH
KIKANMDKQLAVCGEAPFYTLGPLVTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEH
LGLPDRDDVKTGVVTYRIAAHAADLAKGHPAARLRDDALSRARFEFRWRDQFNLSLDPET
AERFHDQTLPAEGAKLAHFCSMCGPKFCSMKISHEVRDAAIQAEADAAAGMAGKSAEFLA
GGGEIYKVLSGEARPGID
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcccgataccctctcccccgcgaacttcggcgtcaccaccgggcccttgccggcctcg
cgcaaggtccatgtcgcgggcggccgcgacggcagcctgcgcgtggcgatgcgcgagatc
gacctcgaccccggctgcggcgagccgccggtccgggtctacgacccttccggcccctat
accgacccggccgtggcgatcgacatcgccgccggcctgccggccctgcggcgcgactgg
atcctggcccgcggcgatgtggagccctatcccggccggtccgtccggcccgaggataac
ggcctgaagccgggttctgccggtaccgtcccggtgttcgatcgcggcgaccggcggccg
ctcgtcgcccggcccggctgccggccgacccagctcgcctatgcccgcgccggcatcgtc
acgcccgagatggagtatgtggcgatccgcgagaatctcggccgggagcgggcgctcgat
gcggccgcgcgcgacggcgagggcttcggcgccgccatccccgacttcgtgacgccggag
ttcgtgcgcgacgaggtcgcccgcggccgggcgatcatccccgccaacatcaaccacccg
gaggccgagccgatggcgatcggccgcaacttcctggtcaagatcaatgccaacatcggc
aactccgccgtcacctcgtcggtggcggaggaggtcgacaagctggtctgggcgatccgc
tggggcgccgacacggtcatggacctgtcgaccgggcgcaacatccacaccatccgcgaa
tggatcctgcgcaacgccccggtgccgatcggcaccgtgccgatctaccaggcgctggag
aaggtgggcggccgggccgaggagctgacctgggagatctatcgcgacacgctggtcgag
cagtgcgagcagggggtcgactacttcaccatccatgccggggtgcggctggcgcacatc
ccgctgacggccaggcgggtgacgggcatcgtctcgcgcggcggctcgatcatggccaag
tggtgcctggcccatcaccgggagagcttcctctacacccgcttcgaagagatctgcgag
atcatgcgggcctacgacgtctccttctcgctgggcgacgggctgcggccgggatcgaac
gccgacgccaacgacgccgcccagttcgccgagctggagacgctgggcgagctgactcag
gtcgcctggcggcacgacgtgcaggtgatgatcgaggggccgggccatgtgccgatgcac
aagatcaaggccaacatggacaagcagctcgccgtctgcggcgaggcgcccttctatacg
ctggggccgctcgtcaccgacatcgcgcccggctacgaccacatcaccagcggtatcggg
gcggcgatgatcggctggttcggcaccgccatgctctgctacgtcacccccaaggagcat
ctgggcctgcccgaccgcgacgacgtcaagacgggcgtcgtcacctacaggatcgccgcc
cacgcggccgacctggccaagggccatccggcggcccgcctgcgcgacgacgccctgagc
cgggcccgcttcgagttccgctggcgcgaccagttcaacctgtcgctcgacccggagacg
gccgagcgcttccacgaccagaccctgccggccgagggcgccaagctggcccatttctgc
tcgatgtgcgggccgaaattctgctcgatgaagatcagccacgaggttcgcgacgccgcc
atccaggccgaagccgacgcggccgccggcatggccggcaagtcggcggagttcctggcc
ggcggcggcgagatctacaaggttctgtcgggggaggcgcggccgggcatcgactga
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