Stella vacuolata: STVA_42090
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Entry
STVA_42090 CDS
T06335
Name
(GenBank) ligand-gated channel
KO
K16088
outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Organism
svc
Stella vacuolata
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svc02000
]
STVA_42090
Transporters [BR:
svc02000
]
Other transporters
Pores ion channels [TC:
1
]
STVA_42090
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
STN
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
BBK44189
LinkDB
All DBs
Position
complement(4457590..4460043)
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AA seq
817 aa
AA seq
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MGAVVRVPGGSRRSAWCGAVWMTTALAAAWPGGAMAQQGPGAQPAQAQAARYSFDIPPQS
LTDALARFGRQSGMQVSVDAALIRAIASPGASGSMTAEQALARLLAGTGMTYRLTGDNTA
MLQRLPPGASEGATIALDAVRVAGVAGGFHPEQTEGTGAYTASAVTIGKTPTSLRQTPHS
VSVVTRQRMDDQNMTELGDALRAATGVTVASQSGIYAAYLASARGYNTGIQLDGLNQEAN
FGNAQLDLAVYDRVEVLRGPAGLFTGAGSAGVTSNLVRKRALGIPQIIGQLRAGSWDSYR
GEADITGPLTESGNVRARLVTAVEQRGDWLNNTDNDKKLFYNTVEVDIGERGTLSVGGAW
QRADASYSAGLPAFADGRLLDVARSTSLVADWNEGILRNSDVFAEYEHRFDNGGLFKAVA
RHAEASRDVKYLSVISAPAVDGTTPLRAFAQDLDQKTTSADMFFSTPFELGGMTHNILLG
ADYRRSRTAFATRRTAQVATVNIFSFDPATIAEPDFAAAPVIASSRTTTETYGTYGQLRV
KPVDFLTLIAGGRLSWYESKPYDRLAGEAGSGGKESAQFTPYAAAVVDVTPSLSLYASYA
EIFEPQSVLDVAGDVLSPRIGSQVEVGVKGEWFDGRLNASAALYRITDRNNAVDDPDNDG
FSIAAGKVRAQGAEVEIGGALTEHWRVTSGYAYTETRHLAGNVSQSGQPFSTTTPRHDFK
LWTHYRLPDSLVPGLEVGAGVRAVSGFYNQTGAIRRQADAYAIASLRLGYRINDHLQASL
NFENLFDAKYYERVGGATSLNTYGAPRSVVVGLRGTF
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggtggtgcgcgtaccggggggcagcaggcgatcggcctggtgcggcgcggtg
tggatgacgacggcgctcgcggcggcatggccgggcggggccatggcgcagcaggggccg
ggcgcgcaaccggcccaggcccaggccgcccggtacagcttcgacatacctccgcagtcg
ctgaccgacgcgctcgcccggttcggccgccagtccggcatgcaggtctcggtggatgcc
gcgttgatccgcgccatcgcctcgccgggcgccagcgggtcgatgaccgccgaacaggcg
ctggcccgcctgctggcggggacgggcatgacctatcgcctgaccggcgacaacaccgcg
atgctgcagcgcctgcccccgggcgcgtcggagggcgccaccattgctctcgacgcggtg
cgggtggcgggcgtcgcgggcggcttccatcccgagcagaccgagggcaccggcgcctac
accgccagcgccgtcaccatcggcaagacgccgacatcgctgcgccagacgccgcactcg
gtctcggtcgtcacccggcagcggatggacgaccagaacatgaccgagctgggcgacgcc
ctgcgcgcggcgaccggggtcaccgtcgcctcgcagtcgggcatctatgccgcctacctc
gcttcggcgcgcggctacaacaccggcatccagctcgacgggctgaaccaggaggcgaac
ttcggcaatgcccagctcgacctggcggtctatgaccgggtcgaggtgctgcgcgggccg
gccggcctcttcaccggcgccggctcggccggggtgaccagcaacctggtccgcaagcgc
gcgctcggcatcccgcagatcatcggccagctgcgcgccggctcctgggacagctatcgc
ggcgaggcggacatcaccggcccgctgaccgaatccggcaatgtccgcgcccggctggtg
accgcggtcgagcagcgcggcgactggctgaacaacaccgacaacgacaagaagctgttc
tacaatacggtcgaggtcgacatcggcgagcgcggcaccctgtcggtgggcggcgcctgg
cagcgcgccgacgcctcctattccgccgggctgccggccttcgccgacggccgcctgctc
gacgtggcgcgctccacctcgctggtggccgactggaacgagggcatcctccggaattcc
gacgtcttcgccgagtacgaacaccgcttcgacaatggcgggctgttcaaggcggtcgcc
cggcacgccgaggcctcccgcgacgtgaagtacctcagcgtcatcagcgcgcctgccgtc
gacgggaccacgccgctgcgcgccttcgcccaggacctcgaccagaagaccaccagcgcc
gacatgttcttcagcacgccgttcgaactgggcgggatgacccacaacatcctgctgggg
gcggactaccggcgaagcaggaccgcgttcgccacccgccggacggcccaggtcgcgacc
gtcaacatcttctcgttcgatcccgcgacgatcgcggagcccgacttcgccgcagcaccc
gtgatcgccagcagccgcaccacgaccgagacctacggcacctatggccagctgcgggtc
aagccggtcgacttcctgaccctgatcgcgggcgggcgcctcagctggtacgagtcgaag
ccctatgaccggctggcgggcgaggccgggtccggcggcaaggaatccgcccagttcacc
ccctatgccgcggccgtcgtcgacgtcaccccctcgctgtcgctctatgcgagctatgcg
gagatcttcgagccgcagagcgtcctcgacgtggcgggcgacgtgctgtcgccgcgcatc
ggcagccaggtcgaggtcggggtcaagggcgagtggttcgacgggcggctcaacgcgtcg
gccgccctctatcgcatcaccgaccgcaacaacgccgtcgacgatccggacaatgacggc
ttctcgatcgccgccggcaaggtgcgcgcgcagggcgcggaggtggagatcggcggcgcc
ctgaccgagcattggcgggtgacgtcgggctatgcctacaccgagaccaggcatctggcc
ggcaacgtcagccagtccggccagcccttctcgaccaccacgccccggcacgacttcaag
ctgtggacccactaccggctgccggacagcctggtgccggggctggaggtcggggcgggg
gtacgcgccgtcagcggcttctacaaccagaccggcgccatccggcgccaggccgatgcc
tacgccatcgcctcgctccggctcggctaccgcatcaacgaccacctccaggcttcgctc
aacttcgagaacctgttcgacgccaagtattacgagcgggtcggcggcgccacgagcctg
aacacctacggcgcgccgcgcagcgtcgtcgtggggctgcgcgggaccttctag
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