Stella vacuolata: STVA_43250
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Entry
STVA_43250 CDS
T06335
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
svc
Stella vacuolata
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
svc01002
]
STVA_43250
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
svc01011
]
STVA_43250
Peptidases and inhibitors [BR:
svc01002
]
Cysteine peptidases
Family C82
STVA_43250
Peptidoglycan biosynthesis and degradation proteins [BR:
svc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
STVA_43250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
TonB_2
Motif
Other DBs
NCBI-ProteinID:
BBK44305
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Position
4590944..4592596
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AA seq
550 aa
AA seq
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MIPLSAWAAQPGAPPPSAVEKPAMPTWIADFVGDQSTALSSWPGRQVGQVREFYATADFQ
PRWTSESGLTERGRALIEALALAEEHGISTEALGLPALKAMVERADPAARPQLELALTGA
LLRYAGWLLGVERDEGAPRHAVFVLPPDQIDPRELARLVETGDMRQLVATLSPANSQYQR
LLAARRIYKERAAQQAASARIPDGPTIRGGYLDGRVPAIRARLAAWGETVQAAGEPNRFD
QTLKQAVMRFQAANRLQPDGHVGRATLAALNAGPADRLVQIDATLERWRRMPRDLGARHV
LVNVPAFTLAVMEGDRATMQMKVVVGTRARQTPTFSSRLATVEVNPTWSVPSRLANEDIL
PAIRRNPNYLEEHNIRVLAMVDGRMRQIDPAQIVWEEFAGRVPFRFRQDPGAGNSLGKVK
MMLPNDEAIYLHDTPKRSLFQRTARAYSSGCIRLEKPDLFANLLLTEGAGWSQEQIDATF
AQRATRAVPLRDSLNVHIAYLTAWVGDDGKVVFHDDIYGLDAKVLQAVQARKALPAPPTP
ERMRTASARD
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
ttgattccgctgtccgcctgggcggcccagcccggggcgccgccgccgtcggcggtggag
aagccggcgatgccgacctggatcgccgatttcgtcggcgaccagtcgaccgccctgtcg
tcctggccgggccggcaggtgggccaggtgcgcgaattctatgccaccgccgacttccag
ccgcgctggacctccgaatccgggctgaccgagcggggccgggcgctgatcgaggcgctg
gccctggccgaggagcatggcatctcgaccgaggcgctggggctgccggccttgaaggcg
atggtcgagcgggcggatcccgccgcccggccgcagctcgagctggccctgaccggagcg
cttctgcgctatgccggctggctgctgggggtggagcgcgacgagggcgcgccgcggcac
gcggtgttcgtgctgccgcccgaccagatcgacccgcgcgagctggcccgcctggtggag
acgggcgacatgcgccagctggtggcgaccctgtcgccggccaacagccagtaccagcgg
ctgctcgccgcccggcgcatctacaaggagcgcgccgcgcagcaggcggcaagcgcgcgg
atcccggacggcccgaccatccgcggcggctacctcgatggccgcgtgccggcgatccgc
gcccgccttgcggcatggggcgagaccgtccaggcggcgggcgagccgaaccgcttcgac
cagaccctgaagcaggccgtgatgcgcttccaggcggccaaccgcctgcagcccgacggc
catgtcggccgcgccacgctggcggcgctgaatgccgggccggccgaccggctggtccag
atcgacgcgaccctggagcgctggcggcgcatgccgcgcgatctcggcgcccgccacgtg
ctggtcaacgtccccgccttcaccctggcggtgatggaaggcgaccgcgccaccatgcag
atgaaggtggtggtcggcacccgcgcccggcagacgcccaccttctccagccggctcgcc
acggtcgaggtcaacccgacctggtcggtgccctcgcgcctggccaacgaggacatcctg
cccgccatccgccgcaacccgaactacctggaggagcacaatatccgcgtgctcgccatg
gtcgacgggcggatgcgccagatcgacccggcccagatcgtgtgggaggaattcgccggc
cgggtgccgttccgcttccgccaggatccgggggccggcaactcgctcggcaaggtcaag
atgatgctgccgaacgacgaggccatctacctgcacgacacgccgaagcgcagcctcttc
cagcgcaccgccagggcctacagctcgggctgcatccgcctggagaagccggacctgttc
gccaacctgctgctgaccgaaggggcgggctggtcgcaggagcagatcgacgcgaccttc
gcccagcgcgccacccgcgccgtgccgctgcgcgacagcctgaacgtccatatcgcctac
ctgaccgcatgggtcggcgacgacggcaaggtcgtcttccacgacgacatctacgggctg
gacgccaaggtcctgcaggcggtgcaggcccgcaaggccctgccggcgccgccgacgccg
gagcgcatgcgcaccgcatccgcccgcgactga
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