KEGG   Allostella vacuolata: STVA_45900
Entry
STVA_45900        CDS       T06335                                 
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
  KO
K03702  excinuclease ABC subunit B
Organism
svc  Allostella vacuolata
Pathway
svc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:svc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    STVA_45900 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:svc03400]
    STVA_45900 (uvrB)
DNA repair and recombination proteins [BR:svc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     STVA_45900 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      STVA_45900 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII UVR DEAD AAA_30 UB2H P-loop_SecA T2SSE AAA_16 SWI2_SNF2 AAA_22 AAA_7 eIF3_p135 DUF87 Microtub_bd Kinesin
Other DBs
NCBI-ProteinID: BBK44570
LinkDB
Position
4882263..4884389
AA seq 708 aa
MLIDHLDRPVADAAVPFRIQSEFQPAGDQPAAIDALLQGIAQKERDQVLLGVTGSGKTFT
MAHVIQQIQRPALVLAPNKTLAAQLYGEMKSFFPDNAVEYFVSYYDYYQPEAYVPRTDTY
VEKESSINEQIDRMRHSATRALFERRDVIIVASVSCIYGIGSPETYQTMTLTLKAGQTIN
RTQLLARLVELQYRRNDLGFMRGAFRVRGDTVELFPAHYEDRAWRVTMFGDEIESIHEID
PLTGEKVAALQQIKVYANSHYVTPKPTLMQAVEQIKRELKVRLDELYAAGKLLEAQRLEQ
RTTFDMEMMAATGSCAGIENYSRYLTGRAPGEPPPTLFEYLPEDALLILDESHVTVPQIG
GMYRGDYARKSVLSDYGFRLPSCIDNRPLKFEEWEAMRPQSVFVSATPGPWELERTGGVF
VEQVVRPTGLIDPETIIRPTEHQVDDLLAECRSCAAKGQRVLVTTLTKKMAEALTEYMHE
AGIRCRYLHSDVETLERIEIIRDLRLGAFDVLIGINLLREGLDIPECALVAILDADKEGY
LRSRTSLVQTIGRAARHVEGRAILYADRMTASLEYAIEETRRRREKQRAYNLEHGITPES
VRRGISNIMESVYERDHVTVSTGLAEDKPLVGHNLQMVVADLEKQMREAAADLDFEQAAR
LRDEIRRLEAIDLGVAPAPHVSGGGDRPARPAAPKPQGRPRGRGRRAK
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgctgatcgaccatctcgaccgcccggtcgccgacgccgcggtgcccttccgcatccag
tcggagttccagcccgccggcgaccagccggccgcgatcgacgccctgctgcagggcatc
gcccagaaggaacgcgaccaggtgctgctcggcgtcaccgggtcgggcaagaccttcacc
atggcccacgtcatccagcagatccagcggccggccctggtgctggcgccgaacaagacg
ctcgccgcccagctctacggcgagatgaagtcgttcttcccggacaatgcggtggagtac
ttcgtctcctactacgactactaccagccggaagcctacgtcccgcgcaccgacacctat
gtcgagaaggaatcgtcgatcaacgagcagatcgaccgcatgcgccattcggcgacccgg
gccctgttcgagcgccgcgacgtcatcatcgtcgcctcggtctcgtgcatctacggcatc
ggctcgcccgagacctaccagacgatgacgctgaccctgaaggcgggccagaccatcaac
cgcacccagctcctcgcccggctggtcgagctgcagtaccggcgcaacgacctgggcttc
atgcgcggcgccttccgggtgcgcggcgacaccgtcgagctgttccccgcccattacgag
gatcgcgcctggcgggtgacgatgttcggcgacgagatcgaatcgatccacgagatcgac
ccgctgaccggggagaaggtggcggccctgcagcagatcaaggtctacgccaacagccac
tacgtcacgccgaagccgacgctgatgcaggccgtcgagcagatcaagcgcgagctcaag
gtccggctcgacgagctctatgccgccggcaagctgctggaggcgcagcggctggagcag
cgcaccaccttcgacatggagatgatggcggcgaccggcagctgcgccggcatcgagaat
tattcccgctacctgaccgggcgcgccccgggcgagccgccgccgaccctgttcgagtac
ctgcccgaggacgccctgctgatcctcgacgagagccacgtcacggtgccgcagatcggc
ggcatgtaccggggcgactatgcgcgcaagtcggtcctgtccgactacggcttccgcctg
ccgtcctgcatcgacaaccggccgctcaagttcgaggagtgggaggcgatgcgcccgcag
agcgtgttcgtgtcggccacgcccggcccgtgggagctggagcggaccggcggcgtcttc
gtcgagcaggtggtgcggccgaccgggctgatcgaccccgagacgatcatccgcccgacc
gagcaccaggtcgacgacctgctggcggaatgccgcagctgcgccgccaaggggcagcgc
gtcctggtcaccaccctgaccaagaagatggccgaggccctgaccgagtacatgcacgag
gccggcatccgctgccgctacctgcattccgacgtcgagaccctggagcgcatcgagatc
atccgcgacctgcggctcggcgccttcgacgtgctgatcggcatcaacctgctgcgcgag
ggcctcgacatcccggaatgcgcgctggtcgcgatcctcgacgccgacaaggagggctac
ctgcggtcccgcacctcgctggtgcagacgatcggccgcgccgcccgccacgtcgagggc
cgggcgatcctctatgccgaccgcatgacggcctcgctcgaatacgcgatcgaggagacc
cggcggcggcgcgagaagcagcgcgcctacaacctggagcacggcatcaccccggagagc
gtgcgccgcggcatctccaacatcatggagagcgtctacgagcgcgaccatgtgacggtg
tcgacgggcctggccgaggacaagccgctggtcgggcacaacctgcagatggtcgtggcc
gacctggagaagcagatgcgcgaggccgccgccgacctcgacttcgagcaggcggcgcgc
ctgcgcgacgagatccgccggctggaggcgatcgacctcggcgtcgcgccggcaccccat
gtcagcggcggcggggaccggccggcccgcccggccgcccccaagccgcagggccgcccc
cgcggacgcgggcggcgcgccaagtga

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