Allostella vacuolata: STVA_47590
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Entry
STVA_47590 CDS
T06335
Name
(GenBank) spermidine/putrescine ABC transporter ATPase
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
svc
Allostella vacuolata
Pathway
svc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
STVA_47590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
svc02000
]
STVA_47590
Transporters [BR:
svc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
STVA_47590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
TOBE
Rad17
SMC_N
nSTAND_NTPase5
AAA_22
AAA_25
nSTAND1
AAA_16
AAA_30
ORC-CDC6-like
AAA
AAA_19
nSTAND3
AAA_5
ABC_ATPase
NACHT
AAA_23
AAA_28
SRP54
TsaE
Motif
Other DBs
NCBI-ProteinID:
BBK44739
LinkDB
All DBs
Position
complement(5047278..5048381)
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AA seq
367 aa
AA seq
DB search
MSQVSLRNLAKRFGSVAAVDDVTLDVREGELVALLGPSGCGKTTTLRMIAGFIAASSGQI
LIGDQDVTNLPPYRRNTGMVFQGYALFPHMTVFQNVAFGLEMRKVPRADIAPRVAEALRL
VQLGHLGERMPKQLSGGQQQRVALARALVIRPEVFLLDEPLSNLDAKLRLSVRIEIRQLQ
QALGLTTVFVTHDQEEALTLADRLVVMSQGKVQQIGTPTELYERPANHFVADFIGRSNFL
EGTVSAPGHFRTQRGLDVAFADSGAGPRGQGVLAIRPEKATVMPAGTGGEGPNRFPGRVA
FVTYLGASTEIRVQLDSGDELTVTRPNAQPVGDFAGDPGGALGMPVVGQPVTVAWPPAAA
LLLAQPG
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaggtatcgctccgcaacctcgccaagcgcttcggctccgtcgccgccgtcgac
gacgtcacgctcgacgtgcgcgagggcgagctggtggcgctgctcgggccctcgggctgc
ggcaagaccaccaccttgcgcatgatcgcgggcttcatcgccgccagcagcggccagatc
ctgatcggcgaccaggacgtgaccaacctgccgccctatcgccgcaacaccggcatggtg
ttccagggctatgcgctcttcccgcacatgacggtgtttcagaacgtcgccttcgggctg
gagatgcgcaaggtgccccgggccgacatcgcgccccgggtggccgaggcgctgcgcctc
gtccagctcggtcacctgggcgagcggatgcccaagcagctgtcgggcgggcagcagcag
cgggtggcactcgcccgcgcgctcgtcatccggccggaggtgttcctgctcgacgagccg
ctgtcgaacctggatgccaagctgcgcctcagcgtgcgcatcgagatccgccagctgcag
caggcgctgggcctgacgacggtgttcgtcacccacgatcaggaggaggcgctgaccctg
gccgaccggctcgtcgtcatgagccagggcaaggtgcagcagatcggcactccgaccgag
ctgtacgagcgcccggccaaccatttcgtcgccgacttcatcggccgctcgaacttcctc
gaaggcaccgtgtcggcgcccggccatttccgcacccagcgcggcctggacgtcgccttc
gccgattccggcgcgggcccgcgcggccagggcgtgctggcgatccgcccggaaaaggcg
acggtgatgccggccggcaccggcggcgaagggcccaaccgctttccgggccgggtcgcc
ttcgtcacctatctcggcgcttcgaccgagatccgcgtccagctcgattcgggcgacgaa
ctgacggtgacgcggcccaacgcgcagccggtcggcgatttcgccggcgatccgggcggt
gcgctcggcatgccggtcgtcggccagccggtgacggtggcctggccgccggccgccgcg
ctgctgctggcccagcccggctga
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