Stella vacuolata: STVA_50530
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Entry
STVA_50530 CDS
T06335
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
svc
Stella vacuolata
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svc03400
]
STVA_50530
Enzymes [BR:
svc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STVA_50530
DNA repair and recombination proteins [BR:
svc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
STVA_50530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
FCD
Motif
Other DBs
NCBI-ProteinID:
BBK45033
LinkDB
All DBs
Position
5353317..5356364
Genome browser
AA seq
1015 aa
AA seq
DB search
MADQPTIYSIPAGVPFVDALAEGMMARAGGDPLRLARMTVLLPTRRAGRALREAFLRLGD
GRPLLLPRMTPLGDVDADELVLAPADEGGPDGGLDGPLALSGLNRQLLLARLVLAWGANQ
PDGAAGPSGAPSPAQAAALAGELGRLLDQLQTEGIDPARLAELGGDFARHWERTLSFLGI
LTGAWPALLADRQLVDPADRRDRLLRLQAERWRRHPPDGPVIAAGSTGSIPATALLLSVV
ARLPDGALVLPGLDNAGDPILWPAIAADPTHPQHGMARLLDGLGVAPHTVPDWPWPAGAR
TGPRARLIAEALRPAEATEVWTRPDWRTAARLEPAGVDAALAGIARIDCPGPHEEAGTIA
LLLREVLETPGRTAALVTPDRTLARRVAAELARWDIVIDDSAGTPLDTTAPGAFLRLLAE
AFADQAAPVPLLALLKHPLAAGGMAPARFRRRVRRLERAVLRGARPAPGIAGIAAALGDG
SDALRRFVDALDRDVRPFAAAIAAPAVDLKTLVRSHVAAAEALAATDREAGSDRLWRGEA
GEAAARFVAELLDAVDDFPPVPGATYTGLFDALSGAVAVRPAYGSHPRLHIWGPLEARLQ
QTDRLILGGLNEGTWPGIARSDPWLNRPMRARLGLPPPERRVGLAAHDFVQAASASEVFL
TRAVKVEGTPTVASRWLLRLDTVLEALGRAMPTAGAPRVWQQRLDDRDAGPDGVPVPRPP
RPIAPPRPKPPVALRPRHLRVTEIETWLADPYAIYARHLLRLRPLDPLDMDPGAAERGTM
IHRALDRFIHDHPPPGPLPPDALPRLLDHGRAALAELLQRPIVRAFWWPRFVRIAEWFLA
EEAARRGAITASRTECDGLWVLDAPAGPFRLSGRADRIDLLATGEAAIIDYKTGVVPSAR
AVMSGRSPQLPLEAAMAAAGAFPGIPQGPVASLAYWRLSGAAPAGEVSEIARSREQVEAL
VADARDGLAALIARFDQAETPYLAQPRPEWAPRFSDYAHLARVGEWADGAAEDGE
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
gtggcggaccagcccaccatctactcgatcccggccggcgtgcccttcgtggacgcgctg
gccgaggggatgatggcccgggcaggcggcgacccgctgcggctggcccggatgaccgtg
ctgctgccgacccggcgggccggacgggcgctgcgcgaggcgttcctgcggctgggcgac
gggcggccgctgctgctgccgcgcatgaccccgctgggcgacgtcgatgccgacgagctg
gtcctggcccccgccgacgaaggcggtccggacggcgggctcgacggcccgctggcgctg
tccggactgaaccgccagctcctgctggcccgcctggtgctggcctggggcgccaaccag
cccgacggtgcggccgggcccagcggcgcgccgtcgccggcgcaggccgcggcgctggcg
ggcgagctcggccgcctgctcgaccagctgcagaccgagggcatcgaccccgcccgcctg
gccgagctcggcggcgatttcgcccgccactgggaacgcaccctgtcgttcctcggcatc
ctgaccggcgcctggccggccctgctggcggaccggcagctggtcgacccggccgaccgc
cgcgaccggctgctgcgcctccaggccgagcggtggcggcgccatccgccggacggcccg
gtgatcgcggccggctccaccggctcgatccctgcaaccgccctgctgctgtcggtggtc
gcccggctgccggacggcgcgctggtcctgccggggctcgacaatgccggcgatccgatc
ctgtggcccgccatcgccgccgacccgacccatccgcagcatggcatggcccgcctgctg
gacgggctcggcgtcgcgccgcacacggtgccggactggccatggccggccggtgcgcgc
accggcccgcgcgcgcgcctgatcgccgaggcgctgcggccggcggaggcgaccgaggtc
tggacccggcccgactggcgcaccgcggcccgcctggagccggccggcgtcgacgcggcc
ctggccggaatcgcccgcatcgactgccccggcccgcacgaggaagccgggaccatcgcg
ctgctgctgcgcgaggtgctggagaccccgggccgcaccgccgcgctggtcacccccgac
cgcacgctggcccggcgggtggcggccgagctcgcccgctgggacatcgtcattgacgat
tcggcgggaaccccgctcgataccacggcccccggcgcgttcctgcgcctgctggcggaa
gcattcgccgaccaggccgcccccgtccccctgctcgccctgctgaagcacccgctggcg
gccggtggcatggcccccgcccgcttccgtcggcgcgtgcggcggctggagcgcgccgtg
ctgcgcggcgcccgccccgcccccggaatcgccggcatcgccgccgcgctgggcgacggc
tccgacgcgctgcgccggttcgtggacgcgctcgaccgcgacgtccggccgttcgccgcg
gcgatcgccgccccggccgtcgacctgaagacgctggtccgcagtcacgtcgccgcggcc
gaggcactggccgcgaccgaccgcgaggccggatccgaccgcctgtggcgcggcgaggcg
ggggaagccgccgcccggttcgtggccgaactgctggacgcggtcgacgacttcccgccc
gttccgggcgccacctataccgggctgttcgatgccctgtcgggggcggtcgcggtgcgc
cccgcctatggcagccatccccgcctgcacatctgggggccgctggaggcccgtctgcag
cagacggaccgcctgatcctggggggtctcaacgagggcacctggcccggcatcgcccgc
tccgacccgtggctgaaccggccgatgcgcgcgcgcctcggcctgccgccgcccgagcgg
cgggtcggcctggccgcccacgacttcgtccaggcagcgtcggcgagcgaggtcttcctg
acccgtgcggtcaaggtcgagggcacgccgaccgtcgccagccgctggctgctgcgcctg
gacacggtcctggaggcgctgggccgcgccatgcccacggccggcgcgccgcgggtctgg
cagcagcggctcgacgaccgcgacgccggaccggacggggtgccggtcccgcggccgccg
cgcccgatcgccccgccgcggccgaagccgcccgtggccctgcgtccgcgccacctgcgg
gtgacggagatcgagacctggctggccgatccctatgccatctatgcccgccacctgctg
cggctacgcccgctcgacccgctcgacatggaccccggcgccgccgagcgcgggacgatg
atccatcgcgccctcgaccggttcattcacgaccatccgccaccgggccccctgccgccc
gacgccctgccccggctcctcgaccatggccgcgcggcgctggccgagctgctgcagcgg
ccgatcgtccgcgccttctggtggccgcgcttcgtgcgcatcgccgaatggttcctggcc
gaggaagcggcgcggcgcggcgcaatcaccgcttcgcggaccgaatgcgacgggctgtgg
gtgctggacgcgcccgccggcccgttccggctgtccgggcgcgccgaccgcatcgacctg
ctggcgaccggtgaggcggcgatcatcgactacaagaccggggtggtgccgagcgcccgg
gcggtgatgagcggccgctcgccgcaattgccgctggaggccgcaatggcggcggccggc
gccttccccgggatcccccagggtcccgtcgcctcgctcgcctactggcggctgtcgggc
gccgcaccggccggcgaggtgagcgagatcgcccgctcgcgcgagcaggtggaagcgctg
gtcgccgacgcccgcgacgggctggcggcgctgatcgcgcgcttcgaccaggccgagacc
ccgtacctggcccagccccggcccgaatgggcgccgcgcttcagcgactatgcccacctg
gcccgggtcggcgaatgggccgacggagcggccgaggacggggaatga
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