Stella vacuolata: STVA_50540
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Entry
STVA_50540 CDS
T06335
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
svc
Stella vacuolata
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svc03400
]
STVA_50540
Enzymes [BR:
svc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STVA_50540
DNA repair and recombination proteins [BR:
svc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
STVA_50540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
AAA_30
Plectin
Motif
Other DBs
NCBI-ProteinID:
BBK45034
LinkDB
All DBs
Position
5356361..5359867
Genome browser
AA seq
1168 aa
AA seq
DB search
MTRPDPILAASILAASILADPVLAEAAAAQRAAADPAVSAWVGASAGTGKTTVLTNRILR
LLLAGAAPERLLCLTFTKAAAAEMAIRLHRVLGRWATTDDDALGRSLFELEGRVADETRR
DAARRLFARVLDTPGGMRIQTIHAFCQSLLARFPIEAGVPPHFDVADEATSGELLAAALK
ETLAASAREPQLADAVAEVARHVREDAFLDLLAQLLGRRGRIARMQEQAGGLEPLLARIA
AALGVPEDATEASVLAEGCRQGACDEGALRMAARALAAGSDKEAERAQSIQAWLDAIDDR
PGGLPAYGTAFLTKAGAILARLVNKGTAAAYPQAETALRVEALRLLALQERARAAAVRTA
TSALLRLGHAILLRYERAKAARALLDYEDLILHTRALFDLPGIAPWVLYKLDGGIDHVLV
DEAQDTSPDQWAVVAALAEEFFVGRSARDAGRTLFAVGDVKQSIYSFQGADPDAFRRMRL
HFQERAEAAEATWRAVELKVSFRSTEAVLTAVDTVFAGEAARDGLADVARGDPPVIEHLV
FRRRKAGRVEVWPLLAPAEAGDEAAWSPPVDQRFAVSPAARLARRIARLVRGWLDARAPL
ESEGRPIRPGDIMVLLRRRTAFAAQMVRAFKDAGVPVAGIDRMVLPQQIAVMDLAALGRF
ALLPDDDLNLASLLKSPLLGLDEDALFQLASGRGRRSLWSTLTRRRAERADFAAAHAYLA
GRLARADYVTPFAFFAETLGPEQGRRRLLDRLGPDAADPIDEFLSLTLAYERAHAPSLQG
FLQWLDIQATEVRREVEAGTDAVRVMTVHGAKGLEAPIVFLPDTAQIPRDGAPLLWDEEP
GRELMLWPTRRANEERLCRALREAGERRRLQEYRRLLYVAMTRARDRLYVCGWRGTQEPP
AGNWHGLVDEAMRAGLLGEETAEPAFAATDEDDTVWRFDVEGDPVVAKERSGAAVPAAAD
APWLFRPPPPEPSPTRPLAPSRPLEAEPAPRSPVGSDDGMRFRRGLLLHRLLQTLPDLPA
AEREAAAARFLALPVHRLDPATQAEWTREVLAVLDHPDAARLFSAPGQAEVPIVGRVGAV
AISGTIDRLVVTDGWVAILDYKTNRPPPLIEADTPPLYLRQMVAYRDAVAAIYPDRPVRC
AILWTDGPRLMWLSDATLAGATGRRATP
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggccggatcccatcctggccgcctccatcctggccgcctccatcctggccgac
cccgtcctggccgaggcggcggccgcccagcgcgccgccgccgaccccgccgtctcggcc
tgggtcggcgcgtccgccggcaccggcaagaccaccgtgctcaccaaccgcatcctgcgc
ctactgctggcgggggcggcacccgagcgcctgctgtgcctgaccttcaccaaggcggca
gcggccgagatggcgatccgcctgcaccgggtgctcggccgctgggccaccaccgacgac
gacgccctcggccgcagcctgttcgagctcgaggggcgggtcgccgacgagacgcggcgg
gatgcggcacggcgcctgttcgcccgggtcctggacaccccgggcgggatgcgcatccag
accatccacgccttctgccagtcgctgctggcgcgcttccccatcgaggccggggtcccg
ccgcatttcgacgtggcggacgaggccacctcgggcgagctgctggccgccgcgctgaag
gagacgctggccgcgtccgcccgcgagccgcagctggccgatgcggtggcggaggtcgcc
cgccatgtccgcgaggacgcctttctcgacctgctggcccagctcctcggccggcgcggc
cgcatcgcccgcatgcaggagcaggccggcgggctggagccgctgctggcccggatcgcc
gccgcgctcggcgtgccggaggacgcgaccgaggcgtcggtcctggcggagggctgccgc
cagggggcatgcgacgagggcgcgctgcgcatggccgcccgcgcgctcgccgccggatcc
gacaaggaggccgagcgcgcccagtcgatccaggcgtggctggacgccatcgacgaccga
ccgggcggcctgcccgcctacggaacggcattcctgaccaaggccggcgccatcctggcc
cggctggtgaacaagggcacggccgcggcatacccgcaggccgaaacggcgctgcgcgtg
gaggccctgcgcctgctggccttgcaggaacgcgcgcgggcagccgcggtgcggacggcg
acgtcggccctgctgcggctcggccatgccatcctgctgcgctacgagcgggccaaggcg
gcgcgcgcgctgctcgactacgaggacctgatcctgcacacgcgcgcgctgttcgacctg
cccgggatcgcgccctgggtgctctacaagctggacgggggcatcgaccacgtgctggtc
gacgaggcgcaggacaccagccccgaccagtgggcggtggtggccgcgctggccgaggag
ttcttcgtcggccggtcggcccgggatgccggacgcacgctgttcgccgtcggcgacgtg
aagcagtcgatctacagtttccagggcgccgacccggatgctttccggcggatgcgcctg
catttccaggagcgggcggaggcggccgaggcgacgtggcgcgcggtcgagctcaaggtg
tcctttcgctcgaccgaggcggtgctgaccgccgtcgacaccgtcttcgccggcgaggcc
gcccgcgacgggctggccgacgtggcgcgcggcgacccgccggtgatagagcacctggtg
ttccgccgccgcaaggccgggcgggtcgaggtctggccgttgctggccccggcggaggcc
ggcgacgaggccgcctggagcccgccggtcgaccagcgcttcgccgtgtcgccggccgcc
cgcctggcgcggcgcatcgcccgcctggtccgcggctggctcgatgcccgggcgccgctg
gagtcggagggacggccgatccggccgggcgacatcatggtgctgctgcgccggcgcacg
gcgttcgcggcccagatggtccgcgccttcaaggatgcgggcgtgccggtggccggcatc
gaccgcatggtgctgccgcagcagatcgcggtcatggacctggcggcgctgggccgcttc
gccctgctgccggacgacgacctcaacctggcgtccctgctgaaaagcccgctgctcggc
ctggacgaggacgcgctcttccagctcgcatccgggcgcggccgccgctccctgtggtcg
acgctgacccgccgccgcgcggagcgggcggacttcgccgccgcccatgcctacctcgcc
gggcgcctggcgcgggccgactacgtcacccccttcgccttcttcgccgagacgctgggg
ccggaacagggccgccgccggctgctcgaccggctggggcccgatgccgccgacccgatc
gacgagtttctgtccctgacgctggcctacgagcgcgcccacgcgcccagcctgcagggc
ttcctgcaatggctcgacatccaggcgaccgaggtgcggcgcgaggtcgaggccgggacc
gacgccgtccgggtgatgaccgtgcacggtgccaaggggctggaggcgccgatcgtcttc
ctgcccgacaccgcccagatcccgcgcgacggcgcccccctgctgtgggacgaggagccc
ggccgcgaactgatgctgtggccgacccggcgcgccaacgaggaacgcctgtgccgggcc
ctgcgcgaggccggcgagcgccgccgcctccaggaatatcgccggctgctctatgtcgcg
atgacccgggcgcgcgaccgcctctatgtctgcgggtggcgcgggacccaggagccgccg
gccggcaactggcacggtctggtcgacgaggcgatgcgcgccggcctgctgggcgaggag
acggccgagccggcgttcgccgccacggacgaggacgacaccgtctggcggttcgacgtg
gagggcgaccccgtcgtggcgaaagagcggtcgggcgctgcggtgccggcggcggcggac
gcgccctggctgttccggccgccgccgcccgagccgagcccgacccggccgctcgcgcca
tcccgcccgctcgaggccgagccggccccacggtcgccggtcggcagcgacgacggcatg
cgcttccgccgcggcctgctgctgcaccgcctgctgcagaccctgcccgacctgccggcg
gccgagcgcgaagcggcggcggcccgcttcctcgccctgccggtccatcgcctcgatccc
gcgacacaggcggagtggacgcgcgaggtgctggcggtgctcgaccatccggacgccgcc
cggctgttctccgcgcccggccaggccgaggtgccgatcgtcggccgggtcggcgccgtc
gccatctccggcaccatcgaccggctggtcgtcaccgacggctgggttgcgatcctcgac
tacaagaccaaccggccgccgcccctgatcgaggccgacacgccgccgctctacctgcgc
cagatggtcgcgtaccgcgacgccgtcgccgccatctatcccgaccgcccggtgcgctgc
gccatcctgtggacggatgggccgcggctgatgtggctgtcggacgcgacgctggcgggt
gcgaccggccgccgcgccacgccttga
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