Allostella vacuolata: STVA_53440
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Entry
STVA_53440 CDS
T06335
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
svc
Allostella vacuolata
Pathway
svc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
svc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STVA_53440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svc03400
]
STVA_53440
Enzymes [BR:
svc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
STVA_53440
DNA repair and recombination proteins [BR:
svc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
STVA_53440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BBK45324
LinkDB
All DBs
Position
complement(5646576..5647382)
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AA seq
268 aa
AA seq
DB search
MALTVATWNINSVRLRIDLVLRFLREKRPDVLCLQETKAIDDAFPAKAFAEAGYRHRIIR
GMKSYNGVAILSKLPLENVGGHVWCGKDDCRHVFATLPGGIELHNFYIPAGGDVPDPAAN
PKFAHKLAFLDETRDWLLKERRSDKPMILVGDLNIAPLEHDVWSHKQLLDVVSHTPIEVE
KLGAIQAAGEWVDAVRHFVPADQKLYSWWSYRARDWAEADRGRRLDHIWVTPPLRGQLHR
AEILREARGWTQPSDHVPVLVTLDSGTT
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacggtcgcgacctggaacatcaactccgtccgactgcggatcgacctcgtc
ctgcgcttcctccgggagaagcgcccggacgtgctctgcctgcaggagacgaaggcgatc
gacgacgccttcccggccaaggcgttcgcggaggccggctaccggcaccgcatcatccgc
ggcatgaagagctacaacggggtggcgatcctgtcgaagctgccgctggagaacgtcggc
ggccatgtctggtgcggcaaggatgattgccgccacgtgttcgcgaccctgccgggcggc
atcgagctgcacaatttctacattccggccggcggggacgtgcccgacccggccgccaac
ccgaagttcgcgcacaagctggcgttcctggacgaaacccgggactggctgctgaaggaa
cgccggtccgacaagccgatgatcctggtgggcgacctcaacatcgccccgcttgaacac
gacgtatggtcgcacaagcagcttctcgacgtggtcagccacacgccgatcgaggtcgag
aagctgggcgccatccaggccgccggagaatgggtcgatgccgtccggcatttcgtgccg
gccgaccagaagctctattcctggtggagctaccgggcgcgggattgggcggaagccgat
cgcgggcgcaggctcgaccatatctgggtcacgccgccgctccgtggccagttgcatcgg
gcggagatcctgcgcgaggcccgcggctggacccagccgtcggaccatgtgccggtcctg
gtcactctcgattccggcacgacatga
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